Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120999g00002 ATGAGTGGGATTAGCTCACTTGACCTTAACCAAAAGCTGAAAGAGGTGAGATCCAGTGGAGATGATGATCATGTGAAATCCGGTGCAACTATGAGTGATTCAGCAAAACATCAGATGCCGAAAACTCATCAAGCGAAACATGCGTTTTCAATGAAGGATCGCATGGGTAATAATCATAGATCTACACAACTAGATCATCGTAACTTCAAGCTTGATAATGATTTGATATCTAAAATCATGAAGAACGATCCTTCCGTTATGGAAAAATTCTTTGAAAAAGTAGTATTGCGGCCACCGGGAGGAATAGAAACAGGAATAAGGATAGTTTATAATTGTGACACTAACAACAACACCAAACCAGTCAGAAACCAAGTTGATGATCAGATCCATCACCACGATGATCTAAATAATGATTCTGTGAATGATGCTGCTGATGATGGTGTGAAAGTTGCTGTTGCTGTTGATGCTGCTGATGGTGGAAAAATTGCTGATGGTGATGAAGCGGGAATCAGGAGCCTTCCGTACAAGAAACATGGACCGTACATGTGTCCAAAGTGTAAGGTGGTGTTTTTAACATCACAAAAATTTGCGGCTCATACAGGTTCTCACTACAAGCATGAGACTAAGGATGAGAAAAAGAAGAGAAGAATGCTGAAAATGATGTGTAGAAACAAGAAAAGAGCCCACGAAATTCAGCAACAGTTCATGGATAATTTAGCAGGAGGAGAAGGATCCAGCACTTTGCACGAGGTGAAAGTGGAATATCAGCCCTATTTTCATAATGATAAAGTTGATGCTCCTTCTGGTTTTCCTGTCCCTTTGGGCCCTGCAAAGATCAAGGTGGAGCCTTTCCCATAG 858 0.4079 MSGISSLDLNQKLKEVRSSGDDDHVKSGATMSDSAKHQMPKTHQAKHAFSMKDRMGNNHRSTQLDHRNFKLDNDLISKIMKNDPSVMEKFFEKVVLRPPGGIETGIRIVYNCDTNNNTKPVRNQVDDQIHHHDDLNNDSVNDAADDGVKVAVAVDAADGGKIADGDEAGIRSLPYKKHGPYMCPKCKVVFLTSQKFAAHTGSHYKHETKDEKKKRRMLKMMCRNKKRAHEIQQQFMDNLAGGEGSSTLHEVKVEYQPYFHNDKVDAPSGFPVPLGPAKIKVEPFP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120999g00002 285 MobiDBLite consensus disorder prediction 14 30 - -
Stsc120999g00002 285 ProSitePatterns Zinc finger C2H2 type domain signature. 183 203 IPR013087 -
Stsc120999g00002 285 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120999g00002 Stsc-Chr120999 9946 10803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120999g00002 149 231 C2H2 Transcription Factor Family AT2G18490 46.429 9.99e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120999g00002 - - ahf:112709584 205.682