Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120997g00002 ATGATGACCCCTTTGGCCTTCACTCAATTCTATGAAAAATGGTTTGATCACCTCCACCACCTTGTCAACCAGCTCTCCGACTCTGCTTCCGCCTTCATAGATGTCAAGGGAGATTATTCTACTAATACTCCTCCAATGACGGCGGAGCAAGAAGAAAAGCTGGTCGAGCTGATTGGCAAGGTGATGTCTCACCATGAGGAGTACTTCAGAGCGAAGTCACTCCTCACAGAGAATGATCCTTTGAGTGTGGTGGCCTCTCCATGGGCTACCACACTCGAGAGATCACTTCATTGGGTCACCGGGTGGAGACCTACTACAGCCTTCCACCTGGTGTACACGGAATCTTCTGTGTTGTTTGAGTCGCACATCATTGATATTCTCCGTGGGGTTCGAACCGGCGACCTTGGCGACCTTTCTCCGACGCAGTTCCGGCGAGTCAGCGAGTTGCAATGTGACACTGTGAAGGAAGAGAATCAAATAACAGATGAGCTTTCAGATTGGCAAGACAGTGCGAGTGAGTTGATGGACCCACGCGCCGATATCAACGAGAAGATCGAACGGCTAGTATGCATCATCAAGAAAGCGGATGATCTACGGCTCAGAACCATGCGCAGCGTCGTTGGCTTACTGTCGCCGCAGCAGGCAATCGAGTTCCTCATCGCTTCTGCGGAGTTGCTCGTTGGAATCCGCGGTTGGGGATCGAATCATGACCGTCCACGTGGCTGA 726 0.5165 MMTPLAFTQFYEKWFDHLHHLVNQLSDSASAFIDVKGDYSTNTPPMTAEQEEKLVELIGKVMSHHEEYFRAKSLLTENDPLSVVASPWATTLERSLHWVTGWRPTTAFHLVYTESSVLFESHIIDILRGVRTGDLGDLSPTQFRRVSELQCDTVKEENQITDELSDWQDSASELMDPRADINEKIERLVCIIKKADDLRLRTMRSVVGLLSPQQAIEFLIASAELLVGIRGWGSNHDRPRG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120997g00002 241 ProSiteProfiles DOG1 domain profile. 4 239 IPR025422 GO:0006351|GO:0043565
Stsc120997g00002 241 Pfam Seed dormancy control 49 113 IPR025422 GO:0006351|GO:0043565
Stsc120997g00002 241 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 7 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120997g00002 Stsc-Chr120997 12706 15051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120997g00002 53 239 Calmodulin-binding Proteins AT5G65210 23.560 1.31e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120997g00002 - - gmx:778192 327.02