Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120996g00014 ATGGATAAAAAAGAAAGTGATCAATCTGCATCAAGAGGGACAAGCACTCCATCACAAACTCAGGTAGTAGTTGGTCCTTTTGTTCCTTCAACTCACCTAAGAGGTCAACAACATTCTCACCATTACATCCACCACCTACAACAACAACAACAACTTCACCAAAAGCTTCACAACTTTTGGGAAAATCAGTTTCGCGAAATCGAGCAAGCGCCCGATTTCAGAAATCACAGCTTGCCCTTGGCTAGAATCAAGAAGATCATGAAGGCTGATGAAAACGTGAAGATGATATCAGCAGAGGCTCCTATTATATTTGCCAAGGCTTTCACAAAAACTGATGTGTTTGATTTTCTTGTTGATGTTGTCCCTAGAGATGAATCTGTGGACCTAGGTTTATATGCTGGTATAAGAAGAGGTGGAGGCAATAATAATGTTGTTCCTTACTATTATTATGTGCCACCTCAGCATATTGTGGGTCCACCACCATATGGGCCTCCTAGAGTGGCTATGGTGGGAAAACAAGTTGCTAATCAAAATAATTATGATGAGCAGCAAAATAGTGAAAATGCTACTCATCCTATGTGTCCAAAGCAGCAAAATCATTCATCTGATTCAGATGATTGA 621 0.4026 MDKKESDQSASRGTSTPSQTQVVVGPFVPSTHLRGQQHSHHYIHHLQQQQQLHQKLHNFWENQFREIEQAPDFRNHSLPLARIKKIMKADENVKMISAEAPIIFAKAFTKTDVFDFLVDVVPRDESVDLGLYAGIRRGGGNNNVVPYYYYVPPQHIVGPPPYGPPRVAMVGKQVANQNNYDEQQNSENATHPMCPKQQNHSSDSDD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120996g00014 206 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 37 108 - -
Stsc120996g00014 206 MobiDBLite consensus disorder prediction 173 206 - -
Stsc120996g00014 206 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 77 108 IPR003958 -
Stsc120996g00014 206 MobiDBLite consensus disorder prediction 1 23 - -
Stsc120996g00014 206 Gene3D Histone, subunit A 40 110 IPR009072 GO:0046982
Stsc120996g00014 206 SUPERFAMILY Histone-fold 32 108 IPR009072 GO:0046982
Stsc120996g00014 206 MobiDBLite consensus disorder prediction 173 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120996g00014 Stsc-Chr120996 43735 44451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120996g00014 56 149 CCAAT-HAP5 Transcription Factor Family AT1G56170 47.656 1.48e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120996g00014 K08066 - han:110877767 137.887