Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120996g00001 ATGATCTCTTCAGTGAAGTTAACAGCATCATCATCACCTTTCTCTGCTTTCTCAAGCAGAAAGAAGCTTCATAATCTCCAAACAAGGTCTCAACTTTCCACATTACCCACCATTCAAATCGCAAAACAAAACTTGGGTCACTCTCCATTCTTCACCCACAAGCCTCTCTACCTTGAATCCACATTCAAGGCCATCAATGCAATAACAAGAAGAAGAAGGGATGATGATTCCAGCGTTGTGTGCCAGGCCTATGAAGCTGACAGGTCAAGGCCAATAGAGATTCAGCTTCCTGATGAAGAGGTTGCTCAGAAGCTCAAGATGGGACTCTACTTTGCTACATGGTGGTCTCTTAATGTGGTGTTCAACATATATAACAAGAAGGTCCTCAACGTCTTTCCTTATCCATGGCTTACCTCAACTTTGTCCCTGGCTGCTGGCTCCCTCATCATGTTGGTTTCTTGGGCTACAAGGGTTGCTGAACCCCCAAAAGTCAACTTTGACTTCTGGAAGGCCCTTCTTCCTGTTGCTGTGGCACACACAATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTTGCTGTTTCATTCACTCACATAATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTGTCAAGGTTCTTGCTCGGAGAAGCATTCCCTTTACCGGTTTACCTCTCATTGCTGCCAATTATTGGTGGTTGTGCACTCGCCGCTGTAACCGAGCTCAATTTCAATATGATTGGGTTTATGGGGGCTATGATATCAAACATGGCATTTGTGTTTAGGAATATATTCTCAAAGAAGGGGATGAAGGGCATGTCTGTTAGCGGAATGAACTACTATGCTTGCCTTTCAATGTTGTCTTTATTGATCCTAACACCTTTCGCCATTGCTGTTGAGGGCCCCAAGCTCTGGGCTGCTGGCTGGCAAACAGCTCTCTCTCAGATTGGTCCCAATTTTATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCACTTGTATAATCAAGTGTCATATATATCCCTTGATCAGATTTCACCCTTAACATTTAGCATCGGAAACACAATGAAGAGAATCTCCGTGATTGTCTCTTCCATCATTATCTTCCACACGCCAGTTCAGCCCATCAATGCACTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCCAAACAGTGA 1197 0.4495 MISSVKLTASSSPFSAFSSRKKLHNLQTRSQLSTLPTIQIAKQNLGHSPFFTHKPLYLESTFKAINAITRRRRDDDSSVVCQAYEADRSRPIEIQLPDEEVAQKLKMGLYFATWWSLNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLIMLVSWATRVAEPPKVNFDFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNMAFVFRNIFSKKGMKGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKLWAAGWQTALSQIGPNFIWWVAAQSVFYHLYNQVSYISLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120996g00001 398 Pfam Triose-phosphate Transporter family 105 394 IPR004853 -
Stsc120996g00001 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Stsc120996g00001 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc120996g00001 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120996g00001 Stsc-Chr120996 1026 3033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120996g00001 53 398 Antiporters AT1G61800 79.598 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120996g00001 K15283 - gmx:100804205 604.749