Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120995g00001 ATGATGGATGACGGCCACAAACATGGAAACAGTAGGCATACAATGGACTACTACAGAGGACCAAATTCCCCGTGGAGTATGGCTTCCCAGCATCATGTAAAGGAGCCAAATGCACTAGTTTTGAATAAGAAAATTAGGTCCGTTATGGCCGAAAGGCGTGCAATTCTAGAATTGGAGGCTGCTATATCTGAAAGGAATGAAGCCTTGGCTGCTAGAGATGAGGCCTTGCGTCAGAGGGATGAAGCAATTGCTCAGAGGGATAATGCGCTGAGGGAACGCGATAATGCCGTTGCTGCCCTTCAAAATCGGGAAGATGCTATCAACTTCTCATTAGGCAATGGAGTTCAACGTGGTTCAAAACGAATGCGCCATCCTGCTAACTATCTAGGTAACATGACAGATGCCACATACAACACAAAGGATGTGCCGATAACCGATGCCTTCCCAGTAACAATCATACCCTCTGATGCTATCAAATCGCATCGGGCTAAGAAAACTAAGGACAACAAGACAATCACTCCTAAGGCATCAAAGTCCCCTAGTAAAGCAAAGAAAATGGGTGAGGATTTAAATAGACGGGCATCTTCCGAAGGGACGAAGTACAAATCAGAATGGGATAGACAAGACGTTGGCTTGAATTTGGTTACCTTCGACGAAACTTACATGCCTGTGCCGGTTTGCACATGCACCGGAGTACCACGGCAGTGCTACAAATGGGGTAATGGCGGATGGCAGTCATCTTGTTGTACGACCACCTTGTCAATATATCCGCTACCGCAGCTTCCTAACAAGCGGCATGCACGAATCGGAGGGCGAAAGATGAGCGGCAGCGTCTTTACAAGACTACTAAGTAGGTTTGCAGCACAAGGACATGATTTATCTGTACCATTGGATCTTAAGGACTACTGGGCAAGACATGGAACAAATCGCTACATTACTATCAAGTAG 948 0.4631 MMDDGHKHGNSRHTMDYYRGPNSPWSMASQHHVKEPNALVLNKKIRSVMAERRAILELEAAISERNEALAARDEALRQRDEAIAQRDNALRERDNAVAALQNREDAINFSLGNGVQRGSKRMRHPANYLGNMTDATYNTKDVPITDAFPVTIIPSDAIKSHRAKKTKDNKTITPKASKSPSKAKKMGEDLNRRASSEGTKYKSEWDRQDVGLNLVTFDETYMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSIYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFAAQGHDLSVPLDLKDYWARHGTNRYITIK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120995g00001 315 MobiDBLite consensus disorder prediction 161 202 - -
Stsc120995g00001 315 Pfam GAGA binding protein-like family 2 315 IPR010409 -
Stsc120995g00001 315 SMART GAGA_bind_2 2 315 IPR010409 -
Stsc120995g00001 315 MobiDBLite consensus disorder prediction 181 202 - -
Stsc120995g00001 315 Coils Coil 58 92 - -
Stsc120995g00001 315 PANTHER - 2 315 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120995g00001 Stsc-Chr120995 203 3683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120995g00001 2 315 BBR or BPC Transcription factor family AT2G21240 55.521 1.21e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Stsc120995g00001 GAGA_bind 3.9e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120995g00001 - - qsu:112013863 497.664