Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120994g00002 ATGGAGGAGGAGGAGTTTGTCGCAATAATGAAGATTAGTCTACCAGTTGGTATTATTATTGCTATTGTTGGGGGCATATCAATAATATTGATGTGTGCGTATGGTGGAGAGTGGAGAAAGTCCCAAAGGATTAGGAGGAAGCTAAGAATGCAAGGTATAAAGGGGCCTCCACCTTCTTCATTTCTACATGGAAATCTTCCTGATATTAATAGAATCAATAAATCTGCTCATCATCAACAAGCCGAAGCTGTTCAAACAAATAGTTATGATGGTGCTCGTCATCATCCTCATCCTCATCAAGAACTTGACTTCACTGCCTCCCTCTTTCCCTGTTTTGAACACTGGAGAAAACAATACGGACTAGTGTACACTTATTCTACAAGGATGAAACAACACTTATATGTGAACCAACCGGAGCTAGTGACAGAAATGAACAAGATTATGACTCTGGATTTGGGTAAGCCTACTCACGTAACAAAGAACCTTGCACCCCTTCTTGGCAATGGCATTTTAAGATCCAATGGCCTTAGCTGGGCACATCAGAGAAAACTTGTTGCTGCTGAGTTCTTCATGGATAAAGTTAAGGGTATGGTGGGTCTAATGATAGAATCAGCACAACCGTTACTAAAAAAGTGGGAGGAACTTGTAGAGGAAGAAGGAGGCACTGCTGAAGTTGAGGTTAATAAAGATCTGAGAACCTTAGCGGCTGATGTTATTTCAAGAGTTTGTTTTGGCCATTCTTATTCCAAGGGGAAGCAAGTTTTTTCTAAACTTAGATTCATGCAGACGACTATGTCCAAGCATGGCACCTTTCTTTTTGGCGTCAAAGGTCTCTGGGACAAAATAAACTTCCTGAAAAAGAAGGAAAACGAGGTTAGCATGAAGGAGATGGAGACACAGATAGAATCATTAATTTGGGAGTTAGTGGAGGAACGCAAACTAGAATGCTCGGAGAAACCATGTTTAGAGAAAGATTTGATGCAGTTACTACTAGAAGCAGCAGCAATTGATGAAGGTTTACCCAAGAACTCAGGGAAGCAATTTGTTGTGGATAATTGCAAGAATATATATTTTGCTGGGCATGAAACCATTGCTATCACAGCTTCTTGGTGTTTGATGCTTCTTGCTAAGTACCCTCAATGGCAAACTCGTGTGAGGGATGAGATCGTTGAACTCTTTCCCACCGGCATACCAGATGCAGATTCTCTCCCTCTCTTGAAAACGTTGAATATGGTGATTCAAGAAGTGCTACGTTTATACCCAGCAGCAGCCTTTGTTTCAAGGGAGGCATATGAAGATATTCAAATTGGAAACCTTCATGTCCCTAAAGGAGTTTGTTTATGGAGTCTGATTCCAGCAATGAATAGGGACCCTGAAAATTGGGGACAAGATGCAAATGAATTTAAACCAGAAAGGTTCAGTGAGGGTCTCTCTAAAGCTTGCAAGTATCCACAAGCATATGTACCATTTGGATTGGGTCCTCGCACTTGCCTAGGTAAAAATTTTGCAATAGTTCAGTTAAAGGTTGTGTTGGCACTCATCATTTCCAAGTTTAGCTTCTCTTTATCTCCAAGTTATAAGCATTCTCCCAAATATAGGATGATTATAGAACCAGAATATGGTGTGCATATCCTTATTCGAAAGATCTAA 1650 0.4055 MEEEEFVAIMKISLPVGIIIAIVGGISIILMCAYGGEWRKSQRIRRKLRMQGIKGPPPSSFLHGNLPDINRINKSAHHQQAEAVQTNSYDGARHHPHPHQELDFTASLFPCFEHWRKQYGLVYTYSTRMKQHLYVNQPELVTEMNKIMTLDLGKPTHVTKNLAPLLGNGILRSNGLSWAHQRKLVAAEFFMDKVKGMVGLMIESAQPLLKKWEELVEEEGGTAEVEVNKDLRTLAADVISRVCFGHSYSKGKQVFSKLRFMQTTMSKHGTFLFGVKGLWDKINFLKKKENEVSMKEMETQIESLIWELVEERKLECSEKPCLEKDLMQLLLEAAAIDEGLPKNSGKQFVVDNCKNIYFAGHETIAITASWCLMLLAKYPQWQTRVRDEIVELFPTGIPDADSLPLLKTLNMVIQEVLRLYPAAAFVSREAYEDIQIGNLHVPKGVCLWSLIPAMNRDPENWGQDANEFKPERFSEGLSKACKYPQAYVPFGLGPRTCLGKNFAIVQLKVVLALIISKFSFSLSPSYKHSPKYRMIIEPEYGVHILIRKI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120994g00002 549 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS E-class P450 group I signature 116 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS E-class P450 group I signature 234 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS E-class P450 group I signature 348 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 Coils Coil 294 314 - -
Stsc120994g00002 549 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 PANTHER CYTOCHROME P450 FAMILY MEMBER 44 541 - -
Stsc120994g00002 549 Pfam Cytochrome P450 108 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Stsc120994g00002 549 MobiDBLite consensus disorder prediction 76 96 - -
Stsc120994g00002 549 SUPERFAMILY Cytochrome P450 99 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120994g00002 549 Gene3D Cytochrome P450 38 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120994g00002 Stsc-Chr120994 12396 34564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120994g00002 140 546 Cytochrome P450 AT5G24900 55.718 5.34e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120994g00002 K20661 - gmx:100818766 731.865