Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120993g00009 ATGCTTCAACATCCAATAATCGAAGATCAGATTCTACTTANNNNNNNNNNCAGGCCTCAATCTAGCAATGCAGCATCTGAACCGAGGGATTCTTTTTCTCGAGCAGATGGAGAATCCAGACAGCAGCGCATCAGTTTCTCTGCTAACAGGACATCAACAGATAGACCTCCCAAAGCATCAGAGACCACATCAAATGGGTTATCGGTAACTGGAGGAACACAGCAAGAGCAAGTTCGGCCTCTTCTAAGCTTGTTGGAGAAAGAGCCCCCATCTGGACGCTTCTCTGGCCAGCTTGACTATGTGCGTCAGTTTTCTGGATTAGAAAGACATGAAAGTGTACTTCCTTTGCTACATGCCTCTGAAAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTATCTCAACGAGGAAAAGAAAATGGAAATCTTGATTCTGGTACCAGGGTGTCTCACAAAGTTGCTCCCAAGAAATTAGGGACTTCAGGTGCTAGTGAAGGAGCTGCTTCTACATCTGGGATTGTATCTCAAACTGCATCAGGTGTACTATCTGGTTCAGGTGTCCTAAATGCTAGACCAGGTAGTGCAACTTCATCTGGGCTTCTTTCCCACATGGTTTCATCGTTGAATGCAGATGTTGCTCGGGAGTACCTAGAAAAGGTGGCAGATCTACTGCTTGAGTTTGCACAAGCAGACACAACAGTGAAATCTTATATGTGCAGCCATAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAACAGGGTTGAACCTCCTATTCTGTTAAAGATACTGAAGTGTATTAATCATCTGTCAACGGATCCAAATTGCTTAGAAAATCTTCAACGTGCTGAAGCTATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCACGAGGTCCTCAATGCACTGTTCAACTTATGCAAGATAAATAAAAGGAGACAAGAGCAGGCAGCTGAAAATGGGATCATTCCCCATTTGATGCAATTCATTACATCAAATTCTCCCTTGAAACAATATGCATTGCCTCTACTATGTGATATGGCTCATGCATCTCGCAATTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTGAATCTCCTTGAGGATGAAATTTGGTCTGTGANNNNNNNNNNCGACAACGATAGTAAGAAGGTGGAACAAGCATTACTCAAAAAGGATGCCGTTCAAAAGCTTGTGAAGTTCTTCCAGTCCTGTCCAGAGCAGCATTTTGTACACATATTAGAGCCATTCTTGAAAATCATCACAAAATCTGCAAGGATCAATACCACACTGGCTGTTAATGGATTAACACCATTGCTCGTTGCAAGGCTTGATCATCAGGATGCCATTGCTCGTCTTAATTTACTCAGGCTGATAAAGGCTGTGTATGAGCACCATCCGCAGCCGAAGAAGTTGATTGTGGAGAATGATTTGCCTCAGAAACTTCAAAACTTAATAGGTGAACGCAGAGATGGCCAAGTTTTGGTTAAACAGATGGCTACTTCTTTGCTTAAAGCTCTACATATAAACACCGTTTTGTAA 1593 0.4168 MLQHPIIEDQILLXXXXRPQSSNAASEPRDSFSRADGESRQQRISFSANRTSTDRPPKASETTSNGLSVTGGTQQEQVRPLLSLLEKEPPSGRFSGQLDYVRQFSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGKENGNLDSGTRVSHKVAPKKLGTSGASEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSHSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEIWSVXXXXDNDSKKVEQALLKKDAVQKLVKFFQSCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLVARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPQKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120993g00009 530 Gene3D - 396 528 IPR011989 -
Stsc120993g00009 530 Gene3D - 196 395 IPR011989 -
Stsc120993g00009 530 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 62 503 - -
Stsc120993g00009 530 MobiDBLite consensus disorder prediction 38 80 - -
Stsc120993g00009 530 FunFam MAP3K epsilon protein kinase 1-like 192 525 - -
Stsc120993g00009 530 MobiDBLite consensus disorder prediction 15 92 - -
Stsc120993g00009 530 SUPERFAMILY ARM repeat 204 523 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120993g00009 Stsc-Chr120993 67507 72563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120993g00009 18 530 MAP Kinase Kinase Kinase AT3G13530 77.799 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120993g00009 - - lja:Lj3g3v3513490.1 894.804