Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120983g00004 ATGAAGGGTTACGAGCCACGATCAAGTTCATCTTGTGCAGCCTGCAAATTCTTGAAGAGAAGGTGCATCCCAAACTGCATATTCGCCCCTTACTTTCGCTCTGACGAGTGCAAGAAATTCGCCAAGGTTCACAAGGTCTTTGGTGCCAGCAATGTTAGCAAGATCCTCGTTGAGGTCCCGGAGGAGCAGAGGGAGGACACCGTGAACTCCCTCGCCTACGAGGCGGAGGCGCGGCTTAGAGACCCCGTGTACGGCTGCATTGGCGCCATAGCGCTCTTGCAGAGGAAAATGGTGGAGCTTCAGCATGATCTCGCCATTGCCAAGGATCGTCTTGCTCGCTATTCTGCTGCTGCTGCTACTACCACCACTACTACTGATGCTACTTCCATTATTACTTCTTCTTCTTCTTGCTCTGACATGTTTAATATCAATAATTCTCAAGTTAGCTTGCCGCCTTTCCCAACTTCTTGCAGTGATTTCAATGACAGTGGCGGCTTCTGCCACAGCTCGTCTTCGTCTCAGTCGTTTATTACTACCCGACATGAGACCACGGTGGACGATTTCATTCAAATTCCATATATATTTTAG 588 0.4915 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYSAAAATTTTTTDATSIITSSSSCSDMFNINNSQVSLPPFPTSCSDFNDSGGFCHSSSSSQSFITTRHETTVDDFIQIPYIF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120983g00004 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 136 - -
Stsc120983g00004 195 Coils Coil 90 117 - -
Stsc120983g00004 195 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Stsc120983g00004 195 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120983g00004 Stsc-Chr120983 54425 55012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120983g00004 1 126 AS2 family AT3G11090 72.222 3.00e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc120983g00004 LOB 6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120983g00004 - - aip:107608172 293.893