Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120982g00019 ATGAAATTGCTAAAACGAAAGCAGAATCATGATAGTGTTGTGGTATCTGGTGGCTTCACCCCTGATTACAAGTACAACGAAGGATTCGGAAAGGCTGTAGATGAAGATACAAGCAATCGTTCGAGTTCAGGATCAGCTATCTCTAACACAGAGAGTTGTGCTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGTCCTGCTCAATCCGTCGTCTGGGAAGCCATGGTGCCTTCGAAAAAGAGGACCTGCGTGGGTCGTCCAAAGGCTTCTTCTGTTGAGAAGCTAACAAAAGATTTATGCACTATACTTCATGAACAACAATCTTATTTTTCTACATCTTCTGAAGAGGAACTTCTTTTTGAAAGTGAAACACCTATGGTCTCTGTTGAGATAGGACATGGAAGTGTTCTTATAAGACATCCTAGTTATATAGCTCGCGAAGAAGTGTCTGAGACTAGCTCTCTTTCAGTTGATAATAAACAATCTTTAATGAGTGATACATATTCATATTCTGGTCCCTTTCTTATGTATAATGATTCGACTGGTATGAACTTCTCATCCTATGGAGTCGACAAGGTTGAGAATTCTGCTGACCAAGAAACGCAGGAGGAGCAACTTAAAAGTGACAAATCTCAGCTTGAGAGAGTACAAACATACCTTGGAGATCATAATTCACCACTGTGCTCAATAGATTTAAATGATGTAGTAAACTACAAGGAGTTTGTGAGAAACATGACAAATGAAGACCAACAGCTATTACTAAAGTTTCTTCCTATGGTTGATACTGCTAAACTTTCTGATAGCCTCAAAGTCATGTTCAATAGCTCTCAATTCAAGGAGAACTTGACTTATTTTCAGCAGCTTCTTGGGGAAGGTGTCTTCGACATCTCTTTGTCAGGGGCAAAACCTGAAGACTGCAAAACTTTGAAAAGGCTTGCATTATCCAATCTGTCAAAGTCGAAATGGGTAGAACATTATAGTTATCTTAAGAGATGTAAGACCACAGCTGCAAAATCCATTAATCAGGGATCAACTGGTAAAGCATCATCTAATTTTGCAAATGTGAAGAGATTGCGTGATGGCCGAAATCATAACTCCCCAGAACTGAAGACCATGATGAGGAGCCCCAAAGGAATGACCATAAAGATTGGCAGCGAGGGCAAAGAAGTTGTAGAAGATGGCTCATGCTATAGTCCAAAAAGCCTGTTTGCTTTGCCCCCTGATGCTGCCTCCCTCTTGCAAGATTCTTCGAACTTTGTTGAGGAGAGTTCTGATCATGATCTTTTGGTAGAGGTGCCATCTAATAGTTCATTCCCACAGGCAGAACTTCTGCACCCAACATCAAGCTTTGGTGCTCAGGCAAGCACAAGTAGCAGCTCAGTGTACTCACATTTTGTCCATAATTAA 1410 0.4092 MKLLKRKQNHDSVVVSGGFTPDYKYNEGFGKAVDEDTSNRSSSGSAISNTESCAQFGGTDASDLTGPAQSVVWEAMVPSKKRTCVGRPKASSVEKLTKDLCTILHEQQSYFSTSSEEELLFESETPMVSVEIGHGSVLIRHPSYIAREEVSETSSLSVDNKQSLMSDTYSYSGPFLMYNDSTGMNFSSYGVDKVENSADQETQEEQLKSDKSQLERVQTYLGDHNSPLCSIDLNDVVNYKEFVRNMTNEDQQLLLKFLPMVDTAKLSDSLKVMFNSSQFKENLTYFQQLLGEGVFDISLSGAKPEDCKTLKRLALSNLSKSKWVEHYSYLKRCKTTAAKSINQGSTGKASSNFANVKRLRDGRNHNSPELKTMMRSPKGMTIKIGSEGKEVVEDGSCYSPKSLFALPPDAASLLQDSSNFVEESSDHDLLVEVPSNSSFPQAELLHPTSSFGAQASTSSSSVYSHFVHN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120982g00019 469 Pfam Asx homology domain 210 296 IPR028020 -
Stsc120982g00019 469 PANTHER OSJNBB0038F03.10 PROTEIN 2 467 IPR044589 -
Stsc120982g00019 469 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 224 336 IPR044867 -
Stsc120982g00019 469 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120982g00019 Stsc-Chr120982 72205 76167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120982g00019 1 446 C2C2-Gata Transcription Factor Family AT4G17570 47.495 1.96e-104 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120982g00019 - - gmx:100798504 634.795