Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120982g00005 ATGTGCCGCCAAAATTCTCCCGTTCACCATTCCGGCGACGAAGACACCGCCGCCGACGAGAGCCTCCTGATTTACTGCAAGCCTGTTGAGCTTTACAACATTCTCTACCGTCGTTCTCTTCACAACCCTTCATTTCTTAGGAGATCTCTGCGGTATAAAATAAAAGCAAAGCGTAAAAAGAGGTTGAGAGCAGGAATTGTGATTTTCAACTACAGGGACTGTTACAACATGATACGAAAGACTGAAGTGACTGAACATTTTTCCTGTCCATTTTGCTTGATGCAATGTGCCAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTGACTGAAGATTATCAAGCAGTTAATGTCTCTGTAAAAATTGATATATTGAGATCAGAGAATGTTGCTGATGGAGTAAATCCACAATCTCAAACCTTCATATTCTGTTCAAGACCCCGAAAACGTTTACGAAAGGACTCTGTTCAAAATGAAAAGCGAGCCAATGTAAAGTTCCTAGAGTTGGACTCACCAGAGGGAACACACAATGGATTTCTGGAAAAGAACGATGATATCCTCTCCTGCAAAGGGGAGAATTTGTCTAAAACAGCTCATATTATGGGAAAACAAGGTGTTGAAAGATTTGGTCCTGATCTTCCTGGCACCGCAGACTGCCTCGAATATGTTGCGTCCAGTTTCAACATTCAAGGTGTTTCAATTGCCATGCCCCAATCTTCAGGAGACCCGGAAACTAGTAAATCAGTATATAGAAGTGATCCTGCTGTGCCTGCTAAAACAAAGAAGTTAAACATGGATCGATCTGACTCAAAAAACCGAATGCTCCTGCAGAAGAGACAGTTCTTTCACTCACATAGAGTTCAGCCTATGGCTCTAGAACAAGTGTTATCAGATCGCGATAGTGAAGATGAAGTCGATGATGACATTGCAGATCTTGAAGATCGCAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAACTCATGCATCTGTGGAACTCTTTTATGAGGAAGCAAAGGGTGCTGGCTGATGGCCATGTTTCGTGGGCATGTGAGGCATTTTCCAAGCTTCATGGGAAAGAACTAATCGCATCCCCTGCTTTATTTTGTATGGAGTTAATGGGATTCCAGATTGAAATCATGAGTGAATTTAATTTGAAAGTAAAAGGGTCCAAAGAAGAGGAGATACAAGAAGAAAATAATACAGGGAAAATGAATAGATTCTTCAGATGCGTTTTCATGGATTCAATTCCCAGCCCTGAAAACCTCAATTCCCAGATTTCCAATTCGTTGCCCTCACCTTCATGGCCTTCTGAGCCTCCTGATGTTGGTAATTGGTTCTCAAGCTACAAGTATCAGTCTCCCGATCTGGATACAAATTTTGTGTTTCAAGAATCTGCGTTTAGAGAATCCAAAATCCAGAGAAATGAAGAAGAAAAGGCCAACTCTGAAAACGTTAGGATCCAAGATGAAGTAGTTGAGGATGATAAGCACAATGAGAAAGTGTGCTTGACCAGGAGTTTGGATTCCTTCAGCTCAGACTCACCCCTTTCAGAGCCTCGTGACATTGGAAACTGGTTCTCCAGCTATGTATACGAGTCTTATGTGCCGGATACATATAGCATGACTAAGGATGCTGTTTTAGAGGAGAGTGAGTGTGAGGTGGAAAGGCTTAATTTAGAAGTCATAAATGAAGATGAAGACAGGTCTGAGAATAATCATCCAAAACATTGTTTTACACATAATTGCCCTTCTGAGGAAAACAAGAGGGTACAAGAGCCTTCTAGGAGGGGTGACAATGGTAGTGCAGTTGAAAGGAATAAAAGTTTAGCTACTACTTGCAGTTCCCATTTGGAAAATGTTTTGCAGCCATGTATGCAGGATAAGACATTGAAACATAGTTCTGGTCAAAACGAGTATGGAGAAACAATAAGGCTGAATCATGGAAGCCAGAGTTGTAGCCGAGAAGCGCAGATAATGCCATTAGATGTCAAGACAAGTTCAGACCATAGAACTCAAGAAATGGTACAAAATAATGATATCAGAGAGGCAAAATCAGAAGCTAAGATTCAACATGGCAATGTTGATATTTGCACGAGTTTGTGTAAAATATCCTCAGGAAATAAAGAAAATGATGGTTTTGTTTCAACAAGGAAGGACAATTGTGAAAATTCTTGGAAGAAACCAGAAATGGTGTCACTACAATGTTCAATAAATCCAGGAACAGTTCCATTGTCATGTGAAAAGCAAGCTGTCAAAAAGAGGAAGGCATTAACAGATGCAACAAATGTTCAACAATACAATGCCATTGAGATTACAGGGAAATGGAAGTGCCCTCAAAAGGGTAAACCTTATGTTGGGCCTGCTCTGAAGCAGCTTAGGCTTGAGAAATGGGTTCATAGGGTTTTATAA 2451 0.4072 MCRQNSPVHHSGDEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRSLRYKIKAKRKKRLRAGIVIFNYRDCYNMIRKTEVTEHFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENVADGVNPQSQTFIFCSRPRKRLRKDSVQNEKRANVKFLELDSPEGTHNGFLEKNDDILSCKGENLSKTAHIMGKQGVERFGPDLPGTADCLEYVASSFNIQGVSIAMPQSSGDPETSKSVYRSDPAVPAKTKKLNMDRSDSKNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVSWACEAFSKLHGKELIASPALFCMELMGFQIEIMSEFNLKVKGSKEEEIQEENNTGKMNRFFRCVFMDSIPSPENLNSQISNSLPSPSWPSEPPDVGNWFSSYKYQSPDLDTNFVFQESAFRESKIQRNEEEKANSENVRIQDEVVEDDKHNEKVCLTRSLDSFSSDSPLSEPRDIGNWFSSYVYESYVPDTYSMTKDAVLEESECEVERLNLEVINEDEDRSENNHPKHCFTHNCPSEENKRVQEPSRRGDNGSAVERNKSLATTCSSHLENVLQPCMQDKTLKHSSGQNEYGETIRLNHGSQSCSREAQIMPLDVKTSSDHRTQEMVQNNDIREAKSEAKIQHGNVDICTSLCKISSGNKENDGFVSTRKDNCENSWKKPEMVSLQCSINPGTVPLSCEKQAVKKRKALTDATNVQQYNAIEITGKWKCPQKGKPYVGPALKQLRLEKWVHRVL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120982g00005 816 MobiDBLite consensus disorder prediction 577 616 - -
Stsc120982g00005 816 Pfam VEFS-Box of polycomb protein 273 394 IPR019135 -
Stsc120982g00005 816 CDD VEFS-box_EMF2-like 286 384 - -
Stsc120982g00005 816 PANTHER POLYCOMB GROUP PROTEIN 9 60 - -
Stsc120982g00005 816 CDD ZnB-Zn_EMF2-like 13 134 - -
Stsc120982g00005 816 Coils Coil 561 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120982g00005 Stsc-Chr120982 18600 28389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120982g00005 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 2.57e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120982g00005 - - gmx:100807112 634.795