Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120982g00002 ATGGCTTCTGCAACCTTTTTCATCTCTTCCCTTCTCTTTCTTCACATCATCACATTAGCTTTTGCCAACATTACCATAAATTCAACACTCTCCACCACCAACAACAACAATGCATGGCGTTCACCTTCAGGTGAATTTGCTTTTGGATTTCACCAACTCAAAGACACAAATCTCTTCATGGTTGCCATATGGTATGACAAAATACCAGAAAAAACCATAGTTTGGAATTCATGTTCAGACAGCAATCCAACACCAACAGGATCAAAGATTCAGTTAACACCATCAGGTCTAAAATTAACTACTCCTAAAGGTGAATCTACATGGATAGCACAAACCAACAACACTGTTTCCCATGGTTCTATGCTTGACACTGGAAACTTTGTTCTTGCAAGCAGTGATAGCAACAACATACTTGTGTGGCAAAGTTTCAAGAACCCCACAGATACTTTGTTGCCAAACCAAACTCTTGAATCTGATGCCACTCTCACTTCTAGATTGAAAGATACAAACTACACAAGAGGGAGGTTTCAACTCTATTTTCAGAATAACACCATCATGCTTAGTCCTCTGGCATGGCCTACCGAATATCGCTATGATAACTATGTGCCGAGTTTTGTTTTCGGACCTGCTGCTCGCTTGGTGTTTGATGAAAGTGGTGAGATATATGCAGAGACAAAGAGTGGTAACAGAACAACACCACAACAAGCTCCTAAATGGCAATCTAACTTAGATCTTGATCCTGGGAACAATTACTATAGAGCAACGCTTGATTACTATGGAGTTTTAACTCAATATGTTCATCCAAAGGGCTCAAATTCTCAGCAAGGGTGGAGAGTTTTAAGGTACATTCCTAGTAACATTTGCACCAGCATTATGAATGATTATGGAAGTGGTGCTTGTGGTTACAATAGCTATTGCTCCATGGATGATCAGAGGCCTACTTGCAATTGCCCTGAAGGATATACTCTGATTGATCCAAGCAATGTGTTTGGTGGATGCGAACCGAATTTCACTCTTGGTTGTGGAGCAGATAACCGTGGCGAAGAATTGCAAGCGCACCCAGAAGAGCTATATGGTTTTAGTGTTTTGAGTGATGTGGATTTTCCCCTTAATGATTATGAGCAGATTCAACCTTACAATCAAGATGAGTGCCAACAAGATTGTTTACAAGATTGCAATTGTGCTGTTGCAATCTATAACAACAATCAAACCTGCTGGAAGAAGAGGTTGCCTCTTTCTAATGGAAGAGCACAAAGTGGAGGTCAAACAATACTTATCAAAACAAGAGTTGCACCTCTTGGTACTCCCACTGGTGCTGAATCAAAGAAAGATGATAATAAGGTTAAGCCAGTTTTTATTGGGTTACTTATTGGATCGCTTGTCATCAATGTTGTACTCCTGACTGCAGTTCTTTTGGTTATTCGCCTGAAGAAGCGAAAAAGGGAAATCAAAGTCTCTAGTCTTCTAGAAACAAATCTGCATTCGTTTAGCTATGAAGCATTGAAGGATGCGACATGGGGTTTTAGCGAAGAACTGGGAAGGGGTTCCTTTGGCATTGTTTACAAAGGGACCATAGAATCAAGGTTCTATAATGTGGTGGCAGTCAAGAAGCTTGACAGATTGGCACAAGAACGAGAGAAGGAATTCAAGGCTGAGTTGAGTGCAATTGGTAAAACCTGCCACAAGAATCTGGTAAGGTTGATTGGATTCTGTGATGAGGGAACAAACAGGTTACTTGTATATGAGTTCATGAGCAATGGTGCTCTGGCAAACTTCCTATTTGGACAAAGCAAACCCATTTGGGATCTAAGGGTAAGGTTTGCTTTGGGAATTGCAAGAGGGTTGGTGTACTTGCATGAAGAGTGTGACACTCCTATCATTCACTGTGATATAAAACCTCAGAATATACTCATAGATGATAACTTCAATGCAAAGATATCTGACTTCGGGTTGGCCAAGTTGTTGTTGTCTGACCAGAGCAGGACCAACACCATGATCCGAGGAACAAGAGGTTATGTTGCTCCAGAATGGTTCAGGAATGTTCCTGTGACGGTTAAGGTGGATGTTTATAGCTTTGGTGTGATGTTACTAGAGATCATCTGTTGCAGGAAGAGTGTGCTGATGTTGGAGTCCGGTGAGGAAGAGAAGGCTGTGCTGACTGATTGGGCTTATGATTGCTATTTAGAAAAGAGAATAGATATTTTGGTGGATGATGATAAGGTGGCTATAGCTGACAGGGGAAGGTTACAAAGGTGGGTGAAGATAGCAATTTGGTGCATTCAAGAGGATCATGAAATGAGGCCAACAATGGGGATGGTCTTGCAAATGCTTGAAGGCTTGGTTGAAGTCTCTGATCCCCCATCACCTTTTTCTTGA 2376 0.4137 MASATFFISSLLFLHIITLAFANITINSTLSTTNNNNAWRSPSGEFAFGFHQLKDTNLFMVAIWYDKIPEKTIVWNSCSDSNPTPTGSKIQLTPSGLKLTTPKGESTWIAQTNNTVSHGSMLDTGNFVLASSDSNNILVWQSFKNPTDTLLPNQTLESDATLTSRLKDTNYTRGRFQLYFQNNTIMLSPLAWPTEYRYDNYVPSFVFGPAARLVFDESGEIYAETKSGNRTTPQQAPKWQSNLDLDPGNNYYRATLDYYGVLTQYVHPKGSNSQQGWRVLRYIPSNICTSIMNDYGSGACGYNSYCSMDDQRPTCNCPEGYTLIDPSNVFGGCEPNFTLGCGADNRGEELQAHPEELYGFSVLSDVDFPLNDYEQIQPYNQDECQQDCLQDCNCAVAIYNNNQTCWKKRLPLSNGRAQSGGQTILIKTRVAPLGTPTGAESKKDDNKVKPVFIGLLIGSLVINVVLLTAVLLVIRLKKRKREIKVSSLLETNLHSFSYEALKDATWGFSEELGRGSFGIVYKGTIESRFYNVVAVKKLDRLAQEREKEFKAELSAIGKTCHKNLVRLIGFCDEGTNRLLVYEFMSNGALANFLFGQSKPIWDLRVRFALGIARGLVYLHEECDTPIIHCDIKPQNILIDDNFNAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFRNVPVTVKVDVYSFGVMLLEIICCRKSVLMLESGEEEKAVLTDWAYDCYLEKRIDILVDDDKVAIADRGRLQRWVKIAIWCIQEDHEMRPTMGMVLQMLEGLVEVSDPPSPFS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120982g00002 791 FunFam S-receptor-like serine/threonine-protein kinase 475 583 - -
Stsc120982g00002 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Stsc120982g00002 791 Gene3D Phosphorylase Kinase; domain 1 470 583 - -
Stsc120982g00002 791 SUPERFAMILY Protein kinase-like (PK-like) 484 778 IPR011009 -
Stsc120982g00002 791 SMART serkin_6 506 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120982g00002 791 Gene3D - 22 145 IPR036426 -
Stsc120982g00002 791 Pfam Protein kinase domain 509 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120982g00002 791 Pfam PAN-like domain 359 406 IPR003609 -
Stsc120982g00002 791 PIRSF SRK 1 791 IPR024171 GO:0004674
Stsc120982g00002 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 144 - -
Stsc120982g00002 791 CDD PAN_AP_plant 337 428 - -
Stsc120982g00002 791 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 28 788 - -
Stsc120982g00002 791 Pfam D-mannose binding lectin 72 161 IPR001480 -
Stsc120982g00002 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 187 IPR036426 -
Stsc120982g00002 791 Gene3D Hepatocyte Growth Factor 360 424 - -
Stsc120982g00002 791 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Stsc120982g00002 791 SMART blect_4 30 146 IPR001480 -
Stsc120982g00002 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 785 - -
Stsc120982g00002 791 ProSiteProfiles PAN/Apple domain profile. 341 431 IPR003609 -
Stsc120982g00002 791 CDD STKc_IRAK 512 780 - -
Stsc120982g00002 791 Gene3D Transferase(Phosphotransferase) domain 1 584 785 - -
Stsc120982g00002 791 ProSiteProfiles Protein kinase domain profile. 506 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120982g00002 791 ProSitePatterns Protein kinases ATP-binding region signature. 512 537 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120982g00002 Stsc-Chr120982 10123 12611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120982g00002 424 788 Receptor kinase-like Gene Family AT1G56120 38.978 4.04e-67 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc120982g00002 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120982g00002 - - adu:107487498 1348.18