Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120980g00009 ATGCCAAGAAAAGGAATGAGAAGTATCTTCTTCAAACCTTCACCTAATAATCCGCCACGTCACTCACTGCCACCACCACCACCCTCCCCTCTTCGCACCTTCTCCGACACACTTATGCAAGAAAACATCCATACCGCGGAGTCGCTTATAACCAAGTGGGATTTTTATGATAATAACTCCGTTAATCCACGTCACTCAAATTCCACCCCACTCTTCAGCGGAACACGCCAGCATGCTAAACAGTACATTAACGCCGTCAAGGGTCTACAGTCCGCTATGAAGTACCTCGTCGCACAGGAACCCTCCTCTGCTGACCTCCTTCGAGCACAGTCACTCATGCAAATCGCAATGAAAACTCTTGAGAGAGAGTTTCACCAGATCCTCAAGGCCAATAGGGACTACCTCGATCCCGAAACCGTTTCTAACCACTCTGAAACCGTTTCTAACCGTTCCTCAACTGATTTCCGCAACAGTTTCTCTGATTTCGATGAGATTGTTTCCGACGACGAGTTTCGCCTTGCCGGCGAAGGAGTCGCTGATGCCGAGAGAGCTTCCATGCTCGCCGTCAACGATTTGAAGGCGGTAGCGGATTGCATGATTTCCACCGGCTACGGCAGAGAGTGCGTCAAGATTTACGTTTTGGTGAGAAAATCGATTGTTGATGAAGCTCTTTACAATCTCGGAGTGGAACAGTTGAGCTTCTCGCGTCTCCAGAAGATGGACTGGGAGGTGGTTGAGTTGAAGATCAAGCACTGGCTGAACGCTGTGAAGGTTGCCGTCGGAACTCTCTTCAACGGCGAGAGGATACTCTGCGATAGCGTCTTCGCTGCCACGGCACCGGAGAAACGGATTGCAGAGTCCTCCTTCGCGGAGATCGTTAGAGACGGCGCGATGATGCTGCTTGGATTCCCGGAAATGGTTGCAAAGTGCAAGAAAACGCCGGAGAAGATGTTCAAGACTCTCGACATGTACGAAGCGATCTCGGAAAACTGGCCGCAGATCGAGTCTATCTTCTCCTTCGAATCAACCGCCAACGTCCGTACGCAGGCGGTTACTTCCTTGGTGAAGCTCGGCGACGCAGTGAGGACAATGCTATCGGACTTCGAATCGGCGATTCAGAAGGAACCGTGCAAGACGACGACTCCCGGCGGTGGAGTCCACCCGCTCACGCGCTACGTGTTGAATTACCTTTCTCTTCTAGCCGACTACAGCAGCGTCCTCGTTGACATAATCGCCGATTATCCGCAGTCTCCGTTACCGGAATCTTTCTACCGAAGCACGATCCATGAGGATAGTACATCGTCGTCCTTCTCCTCCACGTTACCGCCGTCGGCGATCTCAGAGCGAATCGCGTGGCTGATTCTCGTGGTTTTTTGCAAGCTCGACGTCAAAGCGGAACGCTATAAGGACGTGGCGCTCTCTTACCTCTTCCTCGCTAATAACATGCATTACGTAGTGGAAAAGGTTCGAAAATCAAACCTAGGGTTTCTCCTCGGTGAAGAGTGGTTGGCGAAGCACGAAGCGAAGACGAAGGAGTACGTAGCCAAATACGAGCGCGTAGGGTGGAGCACCGTGCTAGCTTCGCTGCCGGAGAATCCCTCGGCGGATATCACAGCGGAGCAAGCTAAGGCCTGCTTCGTTAGCTTCAACGCAGCGTTTCATGAAGCCTGCGCGAAACAGTCCGGGTGGATTGTACCCGACCCGGAACTGAGAGACGAAATCAAAGGATCGATAACTTGGAAGCTGGTTTCCAAGTACGGCGAATTCTACGAGAAGAATAGGGTCGGGTCGGATTCGGTTCTACGGTTCGTACCAGAAGATATAGGAAACCAATTGTCAGATATTTTGTGCGGCATTGAAGATTCGAGTAGAGGCTCCTCGCACCCTTCAACGACGCGGTCTTCACGTCGCTCCAACGGAAGTGTTGATGCAGCACTTAGTGAGGAAACCTCATCATCTGGGCTACGCCCCAGCGGCAAAAGGATAGGAACTTAG 1995 0.5183 MPRKGMRSIFFKPSPNNPPRHSLPPPPPSPLRTFSDTLMQENIHTAESLITKWDFYDNNSVNPRHSNSTPLFSGTRQHAKQYINAVKGLQSAMKYLVAQEPSSADLLRAQSLMQIAMKTLEREFHQILKANRDYLDPETVSNHSETVSNRSSTDFRNSFSDFDEIVSDDEFRLAGEGVADAERASMLAVNDLKAVADCMISTGYGRECVKIYVLVRKSIVDEALYNLGVEQLSFSRLQKMDWEVVELKIKHWLNAVKVAVGTLFNGERILCDSVFAATAPEKRIAESSFAEIVRDGAMMLLGFPEMVAKCKKTPEKMFKTLDMYEAISENWPQIESIFSFESTANVRTQAVTSLVKLGDAVRTMLSDFESAIQKEPCKTTTPGGGVHPLTRYVLNYLSLLADYSSVLVDIIADYPQSPLPESFYRSTIHEDSTSSSFSSTLPPSAISERIAWLILVVFCKLDVKAERYKDVALSYLFLANNMHYVVEKVRKSNLGFLLGEEWLAKHEAKTKEYVAKYERVGWSTVLASLPENPSADITAEQAKACFVSFNAAFHEACAKQSGWIVPDPELRDEIKGSITWKLVSKYGEFYEKNRVGSDSVLRFVPEDIGNQLSDILCGIEDSSRGSSHPSTTRSSRRSNGSVDAALSEETSSSGLRPSGKRIGT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120980g00009 664 Pfam Exo70 exocyst complex subunit 250 614 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc120980g00009 664 SUPERFAMILY Cullin repeat-like 75 615 IPR016159 -
Stsc120980g00009 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 612 IPR004140 GO:0000145|GO:0006887
Stsc120980g00009 664 MobiDBLite consensus disorder prediction 620 664 - -
Stsc120980g00009 664 MobiDBLite consensus disorder prediction 1 30 - -
Stsc120980g00009 664 MobiDBLite consensus disorder prediction 623 658 - -
Stsc120980g00009 664 Gene3D Exocyst complex component Exo70 63 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120980g00009 Stsc-Chr120980 64539 67472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120980g00009 20 618 EXO70 exocyst subunit family AT5G59730 49.026 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120980g00009 K07195 - gmx:100808078 827.394