Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120979g00017 ATGCAGTACAACATTCCCCTTGTATCTGATAAACCAACTTTAATCTTAGGAGCTGATGTAACACATCCACGACCGAGGAAGACTCGGGTTGTAGGCTCCATGGATTGGCCATTTGTAACCCAGTACCGAGCAGCTGTTTCTGCCCAAAGGCACTGTGAAGAGATTATTCAAGATTTGTACAATACTTCTGAGCATGGAGGAATGATCAGGTTAGTGTGA 219 0.4429 MQYNIPLVSDKPTLILGADVTHPRPRKTRVVGSMDWPFVTQYRAAVSAQRHCEEIIQDLYNTSEHGGMIRLV 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120979g00017 72 Gene3D - 4 70 IPR036397 GO:0003676
Stsc120979g00017 72 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 5 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120979g00017 Stsc-Chr120979 81120 81454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120979g00017 5 70 Eukaryotic Initiation Factors Gene Family AT5G43810 53.165 4.79e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120979g00017 K11593 - gmx:100805246 91.6633