Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120979g00005 ATGGCTTCCCATGTTGCTTTTCTTCATGCTTCTCCTCTTCCTCTTTCTCTTTCTATTCCCAACCAACGTTTCAGTTCCAAACAGCTTCACATAAATGGAATCAAACCCATCACTACCTTCTCTTCTTCTTCTTGGTGCTTCTTTTCACTTTCAACACAAAGAGGGTATTGTTTACCTGTGATTGCTTGTTCCTCTTCCAATGGAAGCGGCCCTAATAATAATAATACTTCTAAGGATGGTGGTGATGGTGTCAAGAGTGTTGAGAAGCTTCTTGAGGAGAAAAGAAGAGCTGAATTGTCTGCTAGGATTGCCTCAGGTGAATTCACAGTGAAACAGCAATCTGGTTTAAGTTCTATGCTAAAGAAGAGCTTGTTAAAGGTGGGGTTGCCCAATGAGGTTGTGGAGTTTTTGCTCGGTTGGGCCGGTGGGGAAGGCGATTACCCCGAAATTCCTGAGGCAAAAGGGTCTATTAGTGCAATTAGAAGTGAGGCGTTCTTCATTCCCTTGTATGAACTTTACCTCACATACGGCGGAATTTTCAGGTTGAGTTTTGGACCAAAGTCCTTTTTGATTGTATCCGATCCAGCTATAGCAAAACACATCTTGAGAGAGAATTCAAAGGCTTATTCGAAGGGTATCTTGGCTGAGATCCTAGAGTTTGTAATGGGGACAGGGCTCATCCCGGCTGATGGGGAAGTGTGGCGAGTTCGACGACGAACTATAGTCCCAGCATTGCATCAAAAGTATGTAGTGGCTATGATTGGCCTTTTTGGACAAGCCACAGATAGGCTCTGCAAGAAGCTAGATGCTGCTGCATCTGATGGGGAAGATGTCGAGATGGAATCACTTTTCTCTCGATTGACCTTGGACATCATCGGAAAGGCAGTATTCAATTACGATTTCGACAGTTTAACAAATGACACCGGTATAGTTGAGGCTGTATATACTGTGCTGAGGGAAGCAGAAGATCGAAGCGTTTCTCCGATTCCAGTATGGGAGATCCCAATATGGAAAGACATATCGCCGCGTCAAAGGAAGGTTTCCGCAGCTCTCAAATTGGTCAATGATACACTTAATGAGCTGGTAGCAATATGCAAGAGATTGGTGGACGAAGAAGAGTTACAGTTTCATGAGGAGTACATGAATGAGCAAGATCCAAGTATTCTGCATTTTTTGTTGGCATCAGGAGATGATGTGTCAAGTAAGCAACTCCGCGATGATTTAATGACAATGCTCATTGCTGGACATGAAACTTCAGCTGCTGTTTTAACTTGGACTTTCTATCTTCTATCAAAGGAGCCTAGAGTTGTGTCGAAGCTCCAAGAAGAGGTTGACTCTGTGCTAGGGGATCGATTTCCAACTATCGAAGACATGAAGAAACTCCGATATACAACCCGAGTGATCAATGAGTCAATGAGGCTTTACCCTCAACCACCAGTGTTGATCCGTCGCTCTCTTGAGAATGATATGCTCGGAAAGTATCCTATAAAAAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGTAGTCCAAATCAATGGGATGATGCTGATAAGTTTCAACCGGAAAGATGGCCAGTAGATGGACCAAACCCCAACGAGACAAATCAAAACTTCAAGTATCTACCATTTGGTGGAGGACCACGGAAATGTGTTGGTGATTTGTTTGCTACATACGAGACCATAGTAGCACTTGCCATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCCCCACCGGTTGAGATGACTACTGGAGCAACAATTCATACAACACAAGGGTTGAAGATGACAGTTACACGCAGAACACAACCTCCAATTGTGCCTTCATTACAAATGTCAACAATGGAAATTGATCCATCCATGAGCAAAGAGGACACAAGTCAGAAAGGCGAAGTTTATCAGGCTCAGTCCTAA 1929 0.436 MASHVAFLHASPLPLSLSIPNQRFSSKQLHINGIKPITTFSSSSWCFFSLSTQRGYCLPVIACSSSNGSGPNNNNTSKDGGDGVKSVEKLLEEKRRAELSARIASGEFTVKQQSGLSSMLKKSLLKVGLPNEVVEFLLGWAGGEGDYPEIPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLSFGPKSFLIVSDPAIAKHILRENSKAYSKGILAEILEFVMGTGLIPADGEVWRVRRRTIVPALHQKYVVAMIGLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVSAALKLVNDTLNELVAICKRLVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVVSKLQEEVDSVLGDRFPTIEDMKKLRYTTRVINESMRLYPQPPVLIRRSLENDMLGKYPIKRGEDIFISVWNLHRSPNQWDDADKFQPERWPVDGPNPNETNQNFKYLPFGGGPRKCVGDLFATYETIVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTRRTQPPIVPSLQMSTMEIDPSMSKEDTSQKGEVYQAQS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120979g00005 642 PANTHER CYTOCHROME P450 FAMILY 4 173 607 - -
Stsc120979g00005 642 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS P450 superfamily signature 544 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS P450 superfamily signature 414 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS P450 superfamily signature 553 564 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 Pfam Cytochrome P450 170 589 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 Gene3D Cytochrome P450 151 617 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 403 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 465 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 553 576 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 543 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 505 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 423 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 PRINTS E-class P450 group I signature 173 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 CDD CYP97 167 600 - -
Stsc120979g00005 642 SUPERFAMILY Cytochrome P450 162 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120979g00005 642 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 546 555 IPR017972 GO:0005506|GO:0016705
Stsc120979g00005 642 FunFam Carotene epsilon-monooxygenase, chloroplastic 151 608 - -
Stsc120979g00005 642 MobiDBLite consensus disorder prediction 620 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120979g00005 Stsc-Chr120979 23582 28160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120979g00005 82 619 Cytochrome P450 AT1G31800 80.222 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120979g00005 K15747 - gmx:100780770 1023.08