Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120977g00010 ATGAAGAGTTTTCTAAGCTACATGTCTATTGTGGAGAGAAACAAGCCTTATGTTGCAATGATCTTTGTTCAGTTTGTATATGCAGGCATGGCTTTGTTATCTAAGGCTGCAATTTCCAAAGGAATGAACCCTTTTGTTTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTACCTTATCTCCATTTGCTTTCTTTGACAGTAAGCAGAGTGCTCCCTTGTCATGCAAGTTACTGTGCAAGTTGTTTCTTGTTTCACTTGTTGGGTTGACAACAAGTTCATCACTTTACTATGTTTCAATCAACTACACTTCTGCAACATTTGCTGCAGCCTCCACTAACACTGTCCCAGCTATTACTTTTATGATGGCAGCTTTAATTAGGGTGGAAAGCATTTCCATAAAAGATGTGCATGGAGTTGCTAAGATTTTGGGTTCTGTTCTGAGTCTTTCTGGGGCAATAACATTTGCCTTAGTCAAAGGACCTGCCCTTGATTTCATGAGATGGTATTCACAAAATCAGAACCATTCATCATCATCATCTTCAACCTCAGTGGTTCACTCCAAAGGGGATAATATCAAAGGTGCTCTTATGATGCTCTCAGCAAACACTGCTTGGTCCTTATGGCTTATTTTGCAGGGATTTGTTGTGAAGGAATATCCAGCAAAATTTAGGCTTACAACTGTACAATGCTTCTTCAGTTTCATTCAATCATCTGTTTTGGCTTTATCAGTAGAGAGAGATTCATCAGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCAGTGGCCTACTGTGGTGTAATTGTAACAGGGATTTGTTATTGGCTACAAGTGTGTACTATAGAGACCAAAGGAGCAGTTTTCACAGCAATGTTCACTCCTCTTGCTCTCATAATCACAGCAATGTTATCAGCACTTTTGTGGAAGGAAACACTTTACTGGGGAAGCATTGGTGGCACTATTTTATTGGTTCTTGGATTGTATAGCGTATTGTGGGGGAAGAGCAAGGAGAGTGTGAGAGGGAAGAATCAACAAGTTGAAGAAACAAAAGAGGAAAATAGATTGGAGTGCATTATACAGAATTGA 1086 0.3941 MKSFLSYMSIVERNKPYVAMIFVQFVYAGMALLSKAAISKGMNPFVFVVYRQAFASVTLSPFAFFDSKQSAPLSCKLLCKLFLVSLVGLTTSSSLYYVSINYTSATFAAASTNTVPAITFMMAALIRVESISIKDVHGVAKILGSVLSLSGAITFALVKGPALDFMRWYSQNQNHSSSSSSTSVVHSKGDNIKGALMMLSANTAWSLWLILQGFVVKEYPAKFRLTTVQCFFSFIQSSVLALSVERDSSAWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGAVFTAMFTPLALIITAMLSALLWKETLYWGSIGGTILLVLGLYSVLWGKSKESVRGKNQQVEETKEENRLECIIQN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120977g00010 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Stsc120977g00010 361 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Stsc120977g00010 361 Pfam EamA-like transporter family 16 149 IPR000620 GO:0016020
Stsc120977g00010 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Stsc120977g00010 361 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120977g00010 Stsc-Chr120977 62513 65410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120977g00010 15 338 Nodulin-like Gene Family AT2G39510 38.650 2.71e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120977g00010 - - gmx:100800562 541.962