Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120977g00008 ATGGATTTTGGAGAATGTGAGTTCTTGACAGAAGTACCTGACCTTTCAGGAGTCCCAAATCTAGGAGCACTGTGTCTTGATAACTGCAGAAATTTAGTTAAAGTGGACAACTCAGTTGGATTTCTGGAGAAACTGATTTTGCTGAGTGCTCAACGATGCACCAATCTCCGCACTCTTGTAGACGAAATCAATCTTCCATCTCTTGAGACTCTGGACCTAAGTGGCTGCACAAGCCTCGTGTGCTTCCCTGAAATCGCGGCAAAGATGGAAAACATTCGAGCAATTTACTTAGACAGCACCGCCATAGACGATTTGCCACTCACCATGTTCAATCTCGTTAGCCTGGAGCGATTGTACATCAGGAACTGCACAGATCTGAAAACGCTTCAAGGTTGCATCCGCTTGTTACCGAACCTCGAGGTCGTGATTTTTCCAAATCAAAGAGGATTTCGATTGAATTCCGTAGTCCACGGATTTCAGCAAGAGATCTCATCGGTGTTCATGATTCACCGCGGTCCTCGTCCTGTTGTTCCGCTTTGGGAAGCTTATTGCACAGTCTCCTCCGATTTGAATCTCATCCGATTATATTACCCTGGCCGCCGTGTTTCTCCGGCAGGAGAATCCAGCGGCGGATCTGAAGGTGCGTCGTGCGTGAGCTTCTGGTACCGGAGAAGACTCCCTGGAGTAATCAGTGTACTGTTCACGACTGAAACAACTGACATCGACGCCATCGGCTCTGTTCTCGAGTTTAGGGTTTTAGCTTTGGTGAATCGGAGTTACATGTTCTCTTCGTCGAGTGTTTACGTAATCTCTGAAACAAGAACGAGGCAGCCGTTACTCGTGAATGTGATTCTCGGCACACTTCAAGGCCACGGCGAGAGATGCGTTTTCAGATCGGAGTCGAATTCGGAGAATGTGTGGAACCTGGTGCAGATCGTTGGCGAGATGTATTTTCACAGGCCGTGTACGGAGGAGGAGGGGAAGAGGACGGCGGTGGGAGCGGTTATGAAACGGAGTAGTGTTCGTTTTGACAGGGAATATTGCTGCATGGAGGATATTCGATATGTGAATGATGAGTGTGATGAGGAAAGTGCAGCATCACGTGAATGTGATGGTTCTTGCTATGCTCCTGAGTCACCGAAATCATGCATTATGCGTGATCCTGGGGATGATGATGCCACTGGTGTTGATCGTAATTTGATTAAAGTTAGCTTGCCAAATATGTTATGGTTCATGGGCCGTATGGAACCTTTTAACCGCCAATAG 1266 0.4755 MDFGECEFLTEVPDLSGVPNLGALCLDNCRNLVKVDNSVGFLEKLILLSAQRCTNLRTLVDEINLPSLETLDLSGCTSLVCFPEIAAKMENIRAIYLDSTAIDDLPLTMFNLVSLERLYIRNCTDLKTLQGCIRLLPNLEVVIFPNQRGFRLNSVVHGFQQEISSVFMIHRGPRPVVPLWEAYCTVSSDLNLIRLYYPGRRVSPAGESSGGSEGASCVSFWYRRRLPGVISVLFTTETTDIDAIGSVLEFRVLALVNRSYMFSSSSVYVISETRTRQPLLVNVILGTLQGHGERCVFRSESNSENVWNLVQIVGEMYFHRPCTEEEGKRTAVGAVMKRSSVRFDREYCCMEDIRYVNDECDEESAASRECDGSCYAPESPKSCIMRDPGDDDATGVDRNLIKVSLPNMLWFMGRMEPFNRQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120977g00008 421 SUPERFAMILY L domain-like 2 148 - -
Stsc120977g00008 421 Gene3D Ribonuclease Inhibitor 1 165 IPR032675 -
Stsc120977g00008 421 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 17 347 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120977g00008 Stsc-Chr120977 41672 42937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120977g00008 9 142 WRKY Transcription Factor Family AT4G12020 37.313 3.26e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120977g00008 - - ahf:112736348 239.195