Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120977g00007 ATGAGAGTCGTCGCTGATACTTTTTCGCGCCGCCGTATTCGCCTCCACGTTCTAGCAGTCGCGGACTCTTGTCCAGCTCCCGACCTCCAGCCTTCGCGCCCCTGCAGCCTTCTGTCGTGCCTCCAACATCCATTCGCTGATAAGTGGCGAAACTTGAATGTTAGCAATGGCACTCAAAGGTCCAAAGAAAAATTTAGGGTTACCAGAATCAAAGCTGCTCCTGCTGATATTGCTACCCCAATTGCTGCTTGTAATGTTGTTGTTGCTACTGGGGAGGATGCTACTCCTGCCACTAATGTAACTCATCAGCCCGATCTTTCTTCTATTGCTGTAGGTGATTCCTCTCAATATGAAGATGCCAAGAATCCTCCATGGTACAATGCAATGGTTCTTAAAGCACTGTCAGCTTTGAAAGATGCTAATGGATCTGACCTGAATGTCATTGTTAATTTTATTGAGGTGAGGATGAATGAGATTGGAAAGACCAGAAATGGTTTTAACATTGTATTTCCCACTGTATTTGTGTTTGGGGAGGGGTGGGGAAAGGTGGTGGGGTGA 558 0.4659 MRVVADTFSRRRIRLHVLAVADSCPAPDLQPSRPCSLLSCLQHPFADKWRNLNVSNGTQRSKEKFRVTRIKAAPADIATPIAACNVVVATGEDATPATNVTHQPDLSSIAVGDSSQYEDAKNPPWYNAMVLKALSALKDANGSDLNVIVNFIEVRMNEIGKTRNGFNIVFPTVFVFGEGWGKVVG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120977g00007 185 PANTHER SINGLE MYB HISTONE 4 47 156 IPR044597 GO:0003691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120977g00007 Stsc-Chr120977 39792 41065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120977g00007 45 156 Single Myb Histone (SMH) Gene Family AT1G17520 41.593 3.47e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120977g00007 K09422 - gmx:778177 97.4413