Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120975g00010 ATGGCCCCGGAATATGCTTTGGAAGGGTGGTTTTCTGTCAAATCTGATGTTTACAGCTTTGGAATACTAATGTTGGAAATTTTAAGTGGGAGAAAGAACATTGGTTTCAACCAACCAGAGCTTCGCCGTGATCAAACCTTAACTCTTATTTCCTATGCATGGCGACTCTGGAACGATGGCAAGGAGCTTGAATTTCTGGATCGTATCCTAGTCAATGCTTGCCCCATAGGTGTGGCATTGAGATGGATTCATATTGGACTCTTATGTGTTCAAGAAAATCCCAAACACAGGCCTACCATGTCCTCGGTTATTTTGATGCTTGGAAGTGCTACAACCCTTCCTCGACCACTTGCACCTCCATTTTCTTCAAGCAACTATTATGATACAAATGATGACCAATCTTCAACAACTGAAGAAGAAGATGATATGGAATTTCAACCCTCTTCCAGTAAAAGTAATAAAAATTTAAAAAGTAGATTCATAGGATAG 489 0.4008 MAPEYALEGWFSVKSDVYSFGILMLEILSGRKNIGFNQPELRRDQTLTLISYAWRLWNDGKELEFLDRILVNACPIGVALRWIHIGLLCVQENPKHRPTMSSVILMLGSATTLPRPLAPPFSSSNYYDTNDDQSSTTEEEDDMEFQPSSSKSNKNLKSRFIG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120975g00010 162 MobiDBLite consensus disorder prediction 148 162 - -
Stsc120975g00010 162 MobiDBLite consensus disorder prediction 118 132 - -
Stsc120975g00010 162 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 149 - -
Stsc120975g00010 162 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Stsc120975g00010 162 SUPERFAMILY Protein kinase-like (PK-like) 1 134 IPR011009 -
Stsc120975g00010 162 MobiDBLite consensus disorder prediction 118 162 - -
Stsc120975g00010 162 Pfam Protein tyrosine and serine/threonine kinase 1 105 IPR001245 GO:0004672|GO:0006468
Stsc120975g00010 162 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120975g00010 Stsc-Chr120975 61371 62450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120975g00010 1 121 Receptor kinase-like Gene Family AT4G23230 52.459 8.02e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc120975g00010 PK_Tyr_Ser-Thr 2.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120975g00010 - - lang:109348525 185.267