Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120975g00008 ATGAGTACATGGCCAACGCTGGTCTTGATGCTTTTTTATTTGGTTAGCTCCTCGTGTCACCTTATCATATATACATACATACATAGTTTCTTTATGCTTTTTCTTTTCTACTCTTATCCTGCTATTGCCATGCATGCAGATCAAAACAAACGTGAAATGCTGGACTGGCCTAAGCGGGAAAAAATTATAAATGGAATTGCAAGAGGTCTTTCGTATTTACACGAGGATTCCCGGCTAAAAGTTATTCACAGAGATTTGAAAGCTAGCAACATATTGTTAGATGAAGATATGAATCCAAAGATATCGGATTTTGGAACAGCTAGAATATTTTATAGAGAGCAAACTGAAGCAAACACTGAAAAGGTTATTGGTACATATGGTTATATGGCCCCGGAATATGCTTTGGAAGGGTGGTTTTCTGTCAAATCTGATGTTTACAGCTTTGGAATACTAATGTTGGAAATTTTAAGTGGGAGAAAGAACATTGGTTTCAACCAACCAGAGCTTCGCCGTGATCAAACCTTAACTCTTATTTCCTATGCATGGCGACTCTGGAACGATGGCAAGGAGCTTGAATTTCTGGATCGTATCCTAGTCAATGCTTGCCCCATAGGTGTGGCATTGAGATGGATTCATATTGGACTCTTATGTGTTCAAGAAAATCCCAAACACAGGCCTACCATGTCCTCGGTTATTTTGATGCTTGGAAGTGCTACAACCCTTCCTCGACCACTTGCACCTCCATTTTCTTCAAGCAACTATTATGATACAAATGATGACCAATCTTCAACAACTGAAGAAGAAGATGATATGGAATTTCAACCCTCTTCCAGTAAAAGTAATAAAAATTTAAAAAGTAGATTCATAGGATAG 873 0.3826 MSTWPTLVLMLFYLVSSSCHLIIYTYIHSFFMLFLFYSYPAIAMHADQNKREMLDWPKREKIINGIARGLSYLHEDSRLKVIHRDLKASNILLDEDMNPKISDFGTARIFYREQTEANTEKVIGTYGYMAPEYALEGWFSVKSDVYSFGILMLEILSGRKNIGFNQPELRRDQTLTLISYAWRLWNDGKELEFLDRILVNACPIGVALRWIHIGLLCVQENPKHRPTMSSVILMLGSATTLPRPLAPPFSSSNYYDTNDDQSSTTEEEDDMEFQPSSSKSNKNLKSRFIG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120975g00008 290 Gene3D Transferase(Phosphotransferase) domain 1 42 242 - -
Stsc120975g00008 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Stsc120975g00008 290 Pfam Protein tyrosine and serine/threonine kinase 36 233 IPR001245 GO:0004672|GO:0006468
Stsc120975g00008 290 SMART serkin_6 13 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120975g00008 290 MobiDBLite consensus disorder prediction 246 260 - -
Stsc120975g00008 290 MobiDBLite consensus disorder prediction 246 290 - -
Stsc120975g00008 290 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 38 243 - -
Stsc120975g00008 290 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120975g00008 290 MobiDBLite consensus disorder prediction 276 290 - -
Stsc120975g00008 290 SUPERFAMILY Protein kinase-like (PK-like) 33 261 IPR011009 -
Stsc120975g00008 290 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120975g00008 Stsc-Chr120975 60604 62450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120975g00008 7 249 Receptor kinase-like Gene Family AT4G23230 51.020 4.22e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc120975g00008 PK_Tyr_Ser-Thr 8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120975g00008 - - lang:109348525 317.39