Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120974g00006 ATGCCTCGTGGAACTCTTGAAGTGATTCTTGTCAGCGCAAAAGATCTTAAGGACGCTGATTTTCTCGGAAAAATGGATCCTTATGTGATTCTGACTTATCGAGCACAGGAGAATCGAAGCAGGGTGGCAAAAGGTGGAGGATCTAACCCTCGTTGGAATGAGAGTTTTCTTTTCACAGTTTCTGATAATGTTGCTGAGCTTAATCTCAGGATTATGGACAAAGATACTTTTACAAAGGATGATTTTGTTGGTGAGGCAAGAATTCCCTTAGAACCAGTTTTTGCTGCGGGTAGCATTCCTGAAACTTCTTACAACGTTGTTAAGAAGCAGAATTACTGTGGGGAGATTAGGCTGGCTCTCACTTTTAATCCTGAGTGGTAA 381 0.4173 MPRGTLEVILVSAKDLKDADFLGKMDPYVILTYRAQENRSRVAKGGGSNPRWNESFLFTVSDNVAELNLRIMDKDTFTKDDFVGEARIPLEPVFAAGSIPETSYNVVKKQNYCGEIRLALTFNPEW 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120974g00006 126 Pfam C2 domain 4 101 IPR000008 -
Stsc120974g00006 126 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Stsc120974g00006 126 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Stsc120974g00006 126 PANTHER C2 DOMAIN-CONTAINING 1 123 - -
Stsc120974g00006 126 Gene3D C2 domain 2 125 IPR035892 -
Stsc120974g00006 126 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120974g00006 Stsc-Chr120974 22865 25294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120974g00006 4 97 C2H2 Transcription Factor Family AT4G21160 35.106 1.72e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120974g00006 - - ahf:112794411 219.935