Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120974g00001 ATGGTCCACAACCTAGCCATGCGTGCAGGAGTTGAGCCTCTACCTAATGGACTCAAACTCTATGGTGCCTACATGAACCACCCTTACTTCCATGGTTCGAAGCCAGTTGAGCCGGAACCAAATGAAGGCTTGGAACAAAGATTTTTGAATATGGCATGGGGTGTTGAGTACCCTCCTGATGGAATTGAAAACCCCATGATGAATCCATTGGCTCCTGGGGCTCCTAGCTTGGCTAGCCTTGGTTGCTCCAAGCTGTTCATTTCGGTTGCAGGGGATGATCGAGTGCTGAGGGATAGAGCAGTTTTGTATTATGAGGCACTCAGGGGCAGTGGCTGGAAAGGTCAAGTGGAGTTGTTTGAAGAGAAAGGAGAGAAACATGTTTATCACATGTTCCATCCTCACACTCCCAATGCCAAGAAATTGATCAACCATCTTACTCATTTTCTTACACAATAA 456 0.4671 MVHNLAMRAGVEPLPNGLKLYGAYMNHPYFHGSKPVEPEPNEGLEQRFLNMAWGVEYPPDGIENPMMNPLAPGAPSLASLGCSKLFISVAGDDRVLRDRAVLYYEALRGSGWKGQVELFEEKGEKHVYHMFHPHTPNAKKLINHLTHFLTQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120974g00001 151 Gene3D alpha/beta hydrolase 1 151 IPR029058 -
Stsc120974g00001 151 Pfam alpha/beta hydrolase fold 3 130 IPR013094 GO:0016787
Stsc120974g00001 151 SUPERFAMILY alpha/beta-Hydrolases 2 150 IPR029058 -
Stsc120974g00001 151 PANTHER ARYLACETAMIDE DEACETYLASE 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120974g00001 Stsc-Chr120974 267 814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120974g00001 1 151 Carbohydrate Esterase AT1G19190 31.818 1.02e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120974g00001 - K13258 gmx:100814777 194.897