Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120971g00020 ATGGAGGCGCCGCCGGGATGGAGAATGGGATGGGATTGGGAAGGGGACGAAGTGATCTGGGCAATGTGGGGAGCAGAGGCAATGGAGCAAGGTAACTGCTCCAAGTTCAAAGGCCAAGAAAAGCCACACTGTTGTTTGAAGCATCCTCTCATCATTGATCTCACCCCATTGGCTCCTTACAACCACCGCTACTTCAACTGCTGCAAGTCTGGCCTCCTCTCTTCCCTCACTCAAGACATCTCCAACTCCGCCGCCTCCTTCCAAATGAACTATAACAAGCCTACTCTCCATAACCCTAATGATCCAAATAATGCCACTTCTTTCACCATGCCTGAGAATTTCACCCTTGGAGTCCCTGGTTACACTTGCAGTGAACCCTTTCAGGTCCCTCCTACGAAGTTCACCTCCGATGGACAGCGATGGCAACAAGTTTTAGAGACATGGAACGTGACGTGTATGTACTCGCAGTATAGAGCGTCGCCAGCACCGAAATGCTGCGTCTCGTTATCTGCATTCTATAACAGCACCATAGTTCCCTGCCCCGTTTGCAGCTGCAACTGCAAAGGCCTACCAGGAGCACATTGTATCGACCCGGAGAAGAGTTCTTCATCATCATCATTGTTGCAACTGCCACAACAAGAATCAACACAAGTGGTGAAGTGTTCGCGTCACATGTGCCCAATTAGAATCCACTGGCACGTTAAACAGAGTTACAAAGAGTATTGGCGGGTGAAGATCACCATCACAAATCTCAACTTGGTCAAGAACTATTCCCAGTGGAATCTTGTTGTGCTGCACCCTAACTTGCAAAGTGTAACACAAGTTTTCAGCTTCAACTACAAGCCCCTCCCTATCTACGGCAATATCAATGATACAGGGATGTTTTGGGGGCTGCAGTACTACAATGACATGTTGCTGTCAGGGAAGGATGGAAACGTGCAAACAGAGATGTTGCTTCACAAAGACAAAGAGGACTTCACATTCAGAGAAGGATGGACTTTTCCCAGAAAAGTTTCATTCAATGGGGAGGAATGTGTAATGCCATCTCCTGATAACTATCCACGCCTCCCAAACACAGCACATGTTCTCACAATCACACCTTGCATACTTTTCTTCCCCTTCTTACTTACTGCCCTCTTTTTTCTTCTCATAAGTTAG 1158 0.4741 MEAPPGWRMGWDWEGDEVIWAMWGAEAMEQGNCSKFKGQEKPHCCLKHPLIIDLTPLAPYNHRYFNCCKSGLLSSLTQDISNSAASFQMNYNKPTLHNPNDPNNATSFTMPENFTLGVPGYTCSEPFQVPPTKFTSDGQRWQQVLETWNVTCMYSQYRASPAPKCCVSLSAFYNSTIVPCPVCSCNCKGLPGAHCIDPEKSSSSSSLLQLPQQESTQVVKCSRHMCPIRIHWHVKQSYKEYWRVKITITNLNLVKNYSQWNLVVLHPNLQSVTQVFSFNYKPLPIYGNINDTGMFWGLQYYNDMLLSGKDGNVQTEMLLHKDKEDFTFREGWTFPRKVSFNGEECVMPSPDNYPRLPNTAHVLTITPCILFFPFLLTALFFLLIS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120971g00020 385 PIRSF COBRA 2 385 IPR006918 GO:0010215|GO:0016020
Stsc120971g00020 385 Pfam COBRA-like protein 5 155 IPR006918 GO:0010215|GO:0016020
Stsc120971g00020 385 PANTHER PROTEIN COBRA 4 372 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120971g00020 Stsc-Chr120971 85385 86813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120971g00020 5 357 COBRA Gene Family AT1G09790 56.944 3.02e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120971g00020 - - lang:109329241 578.17