Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120971g00017 ATGGAAGTAACAGATTTGCAAAAGAAGAAGAAGCAACAGAGCGGCAGCGTGGTGGTCCCCTTTGATGGCAGCGGAAGGCCCTTCATCATGGGCTCCATCTCCATCCAACCACCTTCCACCTCTTCCTCTTCTTCTTCTTCTTCATCTTCTTCTTCATCCAATTCAACTTCATCTTCTACCTCCGCTCCTGCTGCTCCTCCTACCACCACAACTCCTCCGCCGCATCTCATCGACGCAAACCTCGCCATCGCCACCAGATCTGATGACAAGCCTCCTCCGCCGAAGAGGTCCACCAAGGACAGGCATACCAAGGTGGACGGTCGAGGACGCAGAATCCGAATGCCTGCCACCTGCGCCGCTAGGGTTTTCCAGTTGACCAGAGAATTGGGCCATAAGTCTGACGGAGAGACCATCGAGTGGCTACTCCAGCAGGCTGAGCCTGCTATCATCGCCGCCACCGGAACCGGAACCATCCCCGCCAATTTCTCAACTCTCAACGTTTCTTTACGAAGCAGCGGCTCCACGCTTTCTGCTCCGCCTTCCAAGTCCGCACCTCACACTTTTCATGCCGCGGCGTTGGCTCTCGCTCACCACCACCCTTCTTACGAGGAAGCGTTTCATCAGCACACGGCGTTGCTAGGGTTTCATCACCCTCACCACGCGCAGCAGCACCAGCATCTTATGACTGCTGACCAAATTGCAGAAGCGCTTCCCGGCGGCGGTGGAGAGAGTGGTGGTGGTGGCGGTGGCGGCGACTCGAGCGAGAACTATATGAGGAAACGCTTCAGAGAAGACCTGTTTAAAGATGAGAGTAATCAGCAGTCGGAGTCGCAGAATAATGAAAGTGGCGGTGGCGGTGCTGGTGGTGCAGGTGCAGGTGGCGATGGTTCTTCGCCGAAGCCGTTCAAAACAAACCTACAAATGCAGCTGCAACAACAGCAACCTCAACCAGAAGGAGGAGGTGGTGGTTCTTCTGGTCATGGACTTCTTCGCCCGTCAAATTTGGTACCTGCTACTGCCATGTGGGCCGTAGCGCCAGCACCCGCCAGCGGCGGCACAGCAGGCAGCACAATCTGGATGCTTCCAGTGACTTCTGGAGGTGCAGGAGGCATGGCTGCCGGTGGTGCAGCTTCGGAGGCGCAGATGTGGCCTTTTGCTCATCAAGGAGTAGTAGGTAGTGGTGGTGGCGGTGGCGGTGGAAACAGTCCACTTCATTTGATGCCTCGGTTCAACGTTCCACACGGTGGCGTTGAATTCCAGCAAGAGGGACGTGGTGGGCTTCAGTTGGGTTCGATGGTAATTCCGGCGGCGCAGCAGCAGCAGCAGGCGTCTCAGCATCTTGGATTGACGATGTCAGAATCCAACTTGGGAATGCTTGCTGCTCTTAATGCTTACACAAGAGCTGGTTTGAACATGAACATGAATATGAACATCAATAATTCTTCTTCTCACCAACAACACCATCATCATCAGCCTCAGCCTACTGATAGCGCCGAAGATGCTCCTAACACCTCCCAGTGA 1521 0.5503 MEVTDLQKKKKQQSGSVVVPFDGSGRPFIMGSISIQPPSTSSSSSSSSSSSSSNSTSSSTSAPAAPPTTTTPPPHLIDANLAIATRSDDKPPPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHAAALALAHHHPSYEEAFHQHTALLGFHHPHHAQQHQHLMTADQIAEALPGGGGESGGGGGGGDSSENYMRKRFREDLFKDESNQQSESQNNESGGGGAGGAGAGGDGSSPKPFKTNLQMQLQQQQPQPEGGGGGSSGHGLLRPSNLVPATAMWAVAPAPASGGTAGSTIWMLPVTSGGAGGMAAGGAASEAQMWPFAHQGVVGSGGGGGGGNSPLHLMPRFNVPHGGVEFQQEGRGGLQLGSMVIPAAQQQQQASQHLGLTMSESNLGMLAALNAYTRAGLNMNMNMNINNSSSHQQHHHHQPQPTDSAEDAPNTSQ 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120971g00017 506 Pfam TCP family transcription factor 97 207 IPR017887 -
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 475 506 - -
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 33 65 - -
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 1 112 - -
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 269 332 - -
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 235 256 - -
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 300 320 - -
Stsc120971g00017 506 ProSiteProfiles TCP domain profile. 98 152 IPR017887 -
Stsc120971g00017 506 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 459 IPR005333 GO:0003700
Stsc120971g00017 506 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120971g00017 Stsc-Chr120971 70546 73350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120971g00017 95 455 TCP Transcription Factor Family AT1G35560 42.350 9.66e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc120971g00017 TCP 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120971g00017 - - adu:107482753 565.074