Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120967g00001 ATGTACGGATTCGAAGCTATGACCTTCAACATCCACGGCGGTTACCTGGAGGCCATTGTCCGTGGCCACCGCGCCGGTCTCCTCACTACCGCCGACTACAACAACCTCTGCCAATGCGAATCCCTTGACGACATCAAGATGCACCTCTCCGCCACCGAGTACGGCCCTTACCTCCAAAACGAGCCTTCTCCATTGCATACAACTACCATTGTGGAGAAATGCACTCTTAAGCTGGTTGATGATTACAAGCACATGCTGTGCCAAGCCACCGAACCCTTGTCAACCTTTTTAGAATACATCACATATGGTCACATGATTGACAATGTTGTTTTGATTGTTACTGGCACCTTGCATGAGAGAGATGTTCAAGAACTACTAGAAAAATGCCATCCACTCGGCATGTTTGACAGCATTGCTACTCTGGCAGTTGCTCAGAATATGCGGGAGCTCTACAGGCTGGTTCTTGTTGACACTCCACTTGCTCCATACTTCTCTGAGTGTATTACATCTGAGG 514 0.4864 MYGFEAMTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCESLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120967g00001 171 Pfam ATP synthase (C/AC39) subunit 16 167 IPR002843 GO:0046961
Stsc120967g00001 171 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 170 IPR016727 GO:0033179|GO:0046961|GO:1902600
Stsc120967g00001 171 SUPERFAMILY V-type ATP synthase subunit C 14 169 IPR036079 -
Stsc120967g00001 171 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 129 IPR044911 -
Stsc120967g00001 171 FunFam V-type proton ATPase subunit 14 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120967g00001 Stsc-Chr120967 118 1643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120967g00001 1 171 Primary Pumps ATPases(2) AT3G28715 95.906 1.35e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120967g00001 K02146 - tcc:18601456 349.362