Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120963g00005 ATGATTATATTTTCTTCTGTATGTTCTTATGCAAATTATTTAATTATTCTTTCTTCTGTAAGGCTGAGAACAAAAGAGCTTCACAAAGAAAAAGAGGCTGAGAGAAGGAAAGCTGTCGTTGAGAAGGCAGCTGCCACAAGCAAGGGACTTTCTTCGATTATACAACTTGATCTTGATACATTGCAAAACCTTGAATCATTTAGGGACTCATTGTGTGGTTTCCCACCTAAGAGCATAAAGCTGAAAAGGTCATTTGCTATCCAACCTTGGATTGACTCTGATCAAAATGTTGGGAACCTCCTCATGATTGAAGAAGAAAGAGGAGAAGAGATGGTAAAGCAAAAGAAGTGTTACGTGGTTGTTTTTTATGTGGACTGTTACTTCATATTATTATGCCAATTGCTGTTGTTTTTCATAACTTTGTTATTTAAATACAAAAGGAAGCTATAG 450 0.3556 MIIFSSVCSYANYLIILSSVRLRTKELHKEKEAERRKAVVEKAAATSKGLSSIIQLDLDTLQNLESFRDSLCGFPPKSIKLKRSFAIQPWIDSDQNVGNLLMIEEERGEEMVKQKKCYVVVFYVDCYFILLCQLLLFFITLLFKYKRKL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120963g00005 149 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 43 103 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120963g00005 Stsc-Chr120963 43421 45763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120963g00005 26 103 Homeobox Transcription Factor Family AT1G28420 51.485 5.35e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120963g00005 - - adu:107480767 119.398