Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120958g00010 ATGGCGAATGAAGGAGGAGGAACGATAATCTCAGATGAAAATGGAATTACAACAATTTGTGTGCCAAGAAGGGATAGTTATTTGCGTTCTTTAGGGATTTGGGTTGGGGATAATCCATTTGATTTTGTTGTTCCTGTCACCTTGTTCCAAATCAGTATCTTCATTCTAGTTTCTCGAGTTTTGTACATTCTTCTCAGGCCTCTTAGCACACCCAAATTCGTCTGCTATGTCTTGGGTGGTATTCTTGTAGGGCCATCAATTTTGGGTGACCGAATATTTGAAGTTGTATATCCACCAATTCAATCTCCAATCTTGTTCTTATTGGGCAGGATAGGTGCTGCATATAGTGTCTTCTTCATTGTCCTCAAAATGGACATAGTCCCAACCATTAAAGCAGCCAAAAAATATTGGAAATTAGGTTCCATACCCTTCCTCTGTTCTTTAATCGTTATGTACACCATAACACACCACACAAGCTTGGATTACAGAGGCAGATTAAAGCAACCAAACATCCATTGTTGGACTAGCTTCTCCGTCGTCTCCGATTTCCTAATGGAACTCAACCTTATAACAACAGAGCTAGGCCAGATTGCTCTGTCCACCGCCGTCGTCTCCGAGATCTCGCAGTGGATCGTGTTGATCTTCTTTCTGATGAAAACAAACACACTCAAATTCTCATTTTCTCACCTCGGTTTGATCGCGGCGTTCTTGGTGTTCTTGTGCTTCGTCGTGAGGCCGATCATGAAGGTGATAATTAAGCGAACGCCGAAGGGGGAGCCTGTCAAACAGGGCTACGTTATTATGGTCCTCTTAGGGGTTATTGCCATGGCAACAATTAGTGACATGATTGGAATAACCTTCATAATGGGACCTACCCTTTATGGTTTGTTTATCCCTAATGGTCCTCCATTGGCAACAACAATAGTGGAGAGGACTGAGGTTGTTATATCAGAAATTATGATGCCTTTTTTCTATTTGACTTTAGGCACCACCACAAGAATAAGTAGAATTACTGATAAATATTGGTTCCAGAATTTGATAATTGAGGCTGTGGTGTTGGCTGGGGTTGCAACAAGAGTGCTTGTAACTATGGGGATTGGAATGACACATAATATAAGGTGCAAACATGGGTTCATTCTTGGCCTTATCATGAGCATTGAAGGCATACTTGACCTAATCTTGTTTCATGGGATGATGAGATTCCGGATTTTTGAAGATTACATATATGTGATACTTGAACTCCATGCATTGTTGATAACCGCCATTTCAGCACCATTGATAAAGCTCTTATACAAGCATCATCACAGGATATCAAAAGCACCAAGCGCACACGAAGGAAGAGTGAGAACAATCCAAAGCACTTCTCTAACCTCAAAACTCACCATCATTTCTTGCATCCACCAAGAAGCAAACGTTCACAGCATGATCGGCCTTCTAGAATCCTTGAACACAAGCCAAGAGAGCCCCCTCTTTGTCCACGTCATACACCTCGTCGAGCTCTTCGGGAAAAGCGCCCCAATCCTTCTCCCTCTGAAGAAGCAAAGCAACAAGAAGAAGGCGGCGTTGTCGTCGTCATCGTCGTCGAAGTCGAAGTCGTCTATCAATTATCATGAAACCGATCACATCATGCGAGCGTTTGAGAATTACTCGAGAAATTCTACTGCTGGTAATGTGAACGTGCTTTCGTACGTGAACGTTGCGCCGTACAAGATCATGCATGCTTCTGTGTGCAACCTGGCAGATCAAAAGTGTGTGCCTTTGATTCTTGTTCCGTTCTATGAACACCATCACATCATCAATAGCCATGACGCAACCTTCATTCGTGATCTTAACATTTCCTTTCCGCAGAACGCAAGATGTACAGTAGGCATCCTAGTTGACAGGTACTCAACATTGTTTCTGAGTGCGTCGTCGTCATGTTTTCATGTGGCTATCTTCTTTATTGGTGGGCAAGATGATAGAGAAGCACTAGCATTAGGTATTAGGATGTTAGACCGTACAAGCATCAATGTCACACTCTTGCAATTCATTGTAGAAAATCATAACGACAACAAGAACCTATCATCATCACCGTTAGATTCAGATAATAATAGACGAGAAGCCGAGGAGGAGGAGGAGGAAGAAGAAGCGTCGCAGAGGATATTAGACGAATGCTTGGTAGACGAGTTCAAGGGGAAGATGGTTGTCCAAAACAATGCGGATTTTCGCGAGATTGTGGTACAAGACTCGATAGGTGTTCTAGAAGCGATTCGAGGGATGGAGATGGAGGTGTATGACCTTGTCGTTGTGGGGAAGAGGCACCAATTTATGAGCATCACAGATGAAGAGATGATGGATTTCATGGAAAATGCGGATCAATTGGGAGTTATTGGGGACATGTTAGCTTCCACAGAGTTTTATGGTGGAAAAATTTCACTCTTGGTCATGCAATGTGGAGGCAAGAAGGCTTTGGATAAGAAAACATCTACTAATCGCAGTTTAAAATTTTAA 2490 0.4269 MANEGGGTIISDENGITTICVPRRDSYLRSLGIWVGDNPFDFVVPVTLFQISIFILVSRVLYILLRPLSTPKFVCYVLGGILVGPSILGDRIFEVVYPPIQSPILFLLGRIGAAYSVFFIVLKMDIVPTIKAAKKYWKLGSIPFLCSLIVMYTITHHTSLDYRGRLKQPNIHCWTSFSVVSDFLMELNLITTELGQIALSTAVVSEISQWIVLIFFLMKTNTLKFSFSHLGLIAAFLVFLCFVVRPIMKVIIKRTPKGEPVKQGYVIMVLLGVIAMATISDMIGITFIMGPTLYGLFIPNGPPLATTIVERTEVVISEIMMPFFYLTLGTTTRISRITDKYWFQNLIIEAVVLAGVATRVLVTMGIGMTHNIRCKHGFILGLIMSIEGILDLILFHGMMRFRIFEDYIYVILELHALLITAISAPLIKLLYKHHHRISKAPSAHEGRVRTIQSTSLTSKLTIISCIHQEANVHSMIGLLESLNTSQESPLFVHVIHLVELFGKSAPILLPLKKQSNKKKAALSSSSSSKSKSSINYHETDHIMRAFENYSRNSTAGNVNVLSYVNVAPYKIMHASVCNLADQKCVPLILVPFYEHHHIINSHDATFIRDLNISFPQNARCTVGILVDRYSTLFLSASSSCFHVAIFFIGGQDDREALALGIRMLDRTSINVTLLQFIVENHNDNKNLSSSPLDSDNNRREAEEEEEEEEASQRILDECLVDEFKGKMVVQNNADFREIVVQDSIGVLEAIRGMEMEVYDLVVVGKRHQFMSITDEEMMDFMENADQLGVIGDMLASTEFYGGKISLLVMQCGGKKALDKKTSTNRSLKF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120958g00010 829 PANTHER CATION/H + ANTIPORTER 28 810 - -
Stsc120958g00010 829 Gene3D - 46 440 IPR038770 -
Stsc120958g00010 829 MobiDBLite consensus disorder prediction 687 712 - -
Stsc120958g00010 829 Pfam Sodium/hydrogen exchanger family 53 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120958g00010 Stsc-Chr120958 84631 89701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120958g00010 26 810 Antiporter Super Family AT2G13620 30.424 2.65e-114 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120958g00010 - - aip:110268392 1214.52