Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120956g00003 ATGATGAATCTTCTTTCTCTATGTTGGAAGCCGTTCGGCCACGGCGGCGGTGATGCCGTCTCGGCCGCCGGCGGAAGGGAAGGCAAGGACGGCCTTCTCTGGTTCCGCGATGTCGGTAGGTACGGTTCCGGCGAATTCTCGATGGCCGTCGTCCAGGCCAACCAGGTCCTCGAGGATCAGAGCCAGATCGAGTCCGGCCCCCTCGGAACCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGACGCCTCTCGCTACGTCTGCGATAACTTGTTCCGCAACTTCCAAGCTGCTTCAGCTGAGTCACAGGGAGTTGTGACGCCGGAGACTATTCAAACTGCTTTCCAGAGAACTGAGGAAGGGTTCACTGCTCTTGTTTCTGATCTGTGGAGTACTCGGCCTCAGGTTGCCACTACTGGGACTTGCTGTCTGGTTGGAGTGATCTTCCAACAGACGCTATTCGTGGCGAATCTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACCGGTGGGGTAGCAGCAATTCAGCTGTCTACCGAACACAATGCGAATCTTGAGGACATTAGGCAGGAGCTTAAAGAATTGCACCCTGATGATCCCCAAATTGTTGTCCTTAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGGGAACCAATTAATCCCAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTGTGGGAGCACCTGAGTAATGAAAAAGCAGTGGATATTGTTCACAGCAATCCACGGGCGGGTAGTGCAAAGAGGCTAGTGAAGGCTGCACTACAGGAAGCAGCAAGAAAACGAGAGATGAGATATTCAGACCTGAGGAAGATAGACAAGAAGGTTCGTCGGCATTTTCACGATGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATCTCCAGAGGCAACCTTCTCCACCCTCCACTCTCCATTCGCAGCGCCTTGGATCACTGA 1110 0.5018 MMNLLSLCWKPFGHGGGDAVSAAGGREGKDGLLWFRDVGRYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDNLFRNFQAASAESQGVVTPETIQTAFQRTEEGFTALVSDLWSTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANLEDIRQELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLSNEKAVDIVHSNPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGNLLHPPLSIRSALDH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120956g00003 369 SMART PP2C_4 32 344 IPR001932 -
Stsc120956g00003 369 Pfam Protein phosphatase 2C 69 316 IPR001932 -
Stsc120956g00003 369 ProSiteProfiles PPM-type phosphatase domain profile. 42 346 IPR001932 -
Stsc120956g00003 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Stsc120956g00003 369 Gene3D - 37 354 IPR036457 -
Stsc120956g00003 369 SUPERFAMILY PP2C-like 54 347 IPR036457 -
Stsc120956g00003 369 FunFam Probable protein phosphatase 2C 42 36 354 - -
Stsc120956g00003 369 CDD PP2Cc 46 346 IPR001932 -
Stsc120956g00003 369 PANTHER PROTEIN PHOSPHATASE 43 344 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120956g00003 Stsc-Chr120956 19476 23477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120956g00003 1 366 PP2C-type Phosphatase Gene Family AT4G38520 59.467 3.29e-161 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120956g00003 K01102 - qsa:O6P43_003685 656.751