Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120952g00010 ATGGTATTGAAGGTTTCAAGATCGATAGGGGATGCATATCTGAAGAAAGCAGAATTTAATAGGGAGCCTCTACCATCTCAGTACAGGCTAGCTGAGACATTCTTCAAGCCAATTCTTAGTTGTGAGCCATCAATTTCAGTTCACAAACACCACCCCGATGACCAATTCCTCATATTTGCTTCTGATGGTATATGGGAGCATATCGGCAACCAGGAAGCTGTTCACATAATCACCAACAACCCACCTAATTTTACGATTGTTAACGTGAGCATGCATCTTTGTCAACCTTGCTGTGTCGGTCTTTGGACAAGGGTTTTTCGACGACGAGGGCGCCGTCAGCTGGTGGCTACTGTGACTGTGAGTTGTGACGGTGTGTTAATGTTAGTAACGACGTTAGAGTTTCATGTAGTTTGTGAGTGTGAAGTTGCGAAGTACCGAAGGGTTGATCGGGCAAAGTTCGGAGTGGAAGTGGCTGGAAAGAGCGAAAGAAACGAAAGGATCGCAACAAAACCTAGTAGGCTATTATTGGACCAGATGCGTACGCAACGAAAGGAGCCATGCACAGCAGAACTCACGCTTGGGCATCAAAACTGGTGCCTAGGCGTGAATTTGAAGAGCTTAATCACTGAGTCAGGTTTCCCACGCCTAGGCGTTGGTTCTGGCGCTTGGGCGTGTGTTTGGTGGTTGTTCCTGAACTTGGGCAGTTCCCACGCCTGGGCATTGAAGTTGGGCACCTGGGTGTTGGAGTCAGGTGCTGAACAAAGAGCTTGGACTCACGCCCGGCGTTGCGCCCGGGCGTGGAGACTGGATGCTGAACTTAGAGCCGGGATGGTCCATGCCTGA 843 0.4947 MVLKVSRSIGDAYLKKAEFNREPLPSQYRLAETFFKPILSCEPSISVHKHHPDDQFLIFASDGIWEHIGNQEAVHIITNNPPNFTIVNVSMHLCQPCCVGLWTRVFRRRGRRQLVATVTVSCDGVLMLVTTLEFHVVCECEVAKYRRVDRAKFGVEVAGKSERNERIATKPSRLLLDQMRTQRKEPCTAELTLGHQNWCLGVNLKSLITESGFPRLGVGSGAWACVWWLFLNLGSSHAWALKLGTWVLESGAEQRAWTHARRCARAWRLDAELRAGMVHA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120952g00010 280 ProSiteProfiles PPM-type phosphatase domain profile. 1 132 IPR001932 -
Stsc120952g00010 280 PANTHER PROTEIN PHOSPHATASE 2 81 IPR015655 GO:0004722|GO:0006470
Stsc120952g00010 280 Gene3D - 1 120 IPR036457 -
Stsc120952g00010 280 Pfam Protein phosphatase 2C 2 80 IPR001932 -
Stsc120952g00010 280 SUPERFAMILY PP2C-like 3 87 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120952g00010 Stsc-Chr120952 91047 95493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120952g00010 2 83 PP2C-type Phosphatase Gene Family AT3G12620 68.293 2.03e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120952g00010 K01102 - lja:Lj5g3v0615580.1 148.673