Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120952g00005 ATGGCAACTGTTGGTGTTCAAGAAGCTCGTACTCCTCCATTAACTTCAACATCCGAACCACCGTCTCTTTTTGATGGAACCACCAGGTTGTACATCAGTTATGTTTGCCCTTTTGCACAGCGTGCATGGATCACCAGAAACTACAAGGGTCTACAAGAGAAGATCAAATTGGTCCCTATTGACCTTGGAAACAGGCCTGCTTGGTACAAGGAGAAGGTCTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGTAAGGTCATTGGAGAAAGTCTTGATTTGATCAAATATATAGATGCCAACTTCGAAGGGCCATCTGTTGTTCCAACCGATCCTGCAAAGAGAGAGTTTGGTGAGCAATTGGTGTCACAAGTTGATTCAGTCACCAAAGATTTGTATGCTGCATTGAAAGGGGATGCTATACAGCAAGCAAATCCTGTTTTCGATTCCCTTGAGAATGCTCTTGGAAAGTTTGATGATGGGCCATTCTTCCTTGGTCAATTCAGCTGGGTGGATATTGCCTATGTTCCATTCATTGAAAGATTCCAACTTGTCTTTGCCGAGGTTTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAGAGCATTCATTGAGGAGGGGAATAAGATTGATGGATACACGCAAACAAGGGCTGATCCAAAGGAACTAGTTGATATTTACAAGAGGCGTTTCTTGCCCCAACAACAGTGA 717 0.4351 MATVGVQEARTPPLTSTSEPPSLFDGTTRLYISYVCPFAQRAWITRNYKGLQEKIKLVPIDLGNRPAWYKEKVYPENKVPSLEHNGKVIGESLDLIKYIDANFEGPSVVPTDPAKREFGEQLVSQVDSVTKDLYAALKGDAIQQANPVFDSLENALGKFDDGPFFLGQFSWVDIAYVPFIERFQLVFAEVFKHDITEGRPKLRAFIEEGNKIDGYTQTRADPKELVDIYKRRFLPQQQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120952g00005 238 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Stsc120952g00005 238 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Stsc120952g00005 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Stsc120952g00005 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 233 IPR044629 GO:0004364
Stsc120952g00005 238 Gene3D - 105 236 - -
Stsc120952g00005 238 SFLD Glutathione Transferase (cytosolic) 29 206 IPR040079 -
Stsc120952g00005 238 MobiDBLite consensus disorder prediction 1 21 - -
Stsc120952g00005 238 Pfam Glutathione S-transferase, C-terminal domain 140 207 - -
Stsc120952g00005 238 CDD GST_C_Lambda 112 230 - -
Stsc120952g00005 238 FunFam Lambda class glutathione S-transferase 105 236 - -
Stsc120952g00005 238 Gene3D Glutaredoxin 1 104 - -
Stsc120952g00005 238 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Stsc120952g00005 238 SFLD Main (cytGST) 29 206 - -
Stsc120952g00005 238 SUPERFAMILY Thioredoxin-like 21 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120952g00005 Stsc-Chr120952 41202 45019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120952g00005 8 234 Glutathione S-transferase Gene Family AT5G02790 71.366 4.82e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120952g00005 K00799 - gmx:100793025 412.92