Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120952g00003 ATGGCGACTGCTTTTGTGAAAGAAATTCTTCCTCCATCTTTGACTTCAGCCTCCTCACAACCTCCTCTTTTTGATGGAACCACCAGGTTGTACACCAGTTACCAATGCCCATTTGCACAACGTGTGTGGATCACTAGAAACTACAAGGGGCTACAAGATAAGATCAAATTGGTTGCTATTGACCTTGGGGACAGGCCTTCTTGGTACAAGGAGAACGTTTATCCTGAAAATAAGGTGCCATCATTGGAGCACAACGGTAAGGTAGTTGGGGAGAGCCTTGATTTGATCAAATACGTAGATGCAAACTTCGAAGGGCCGTCTCTGTTTCCCAATGATCCTGCGAAGAGAGAGTTTGGTGAGAAGTTGGTATCTGAAGTTGATTCAGTCACCAGAGAGTTGTTCTCTTCATTGAAAGGGGATGCTGTACAACAAACAAGTTCTGTTTTTGATTCCCTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTTCTTGGTCAATTCAGTTGGGTGGATATTGCTTATATTCCATTTATTGAAAGATTCCACATTGTGCTTGCTGAGGTGTTCAAACATGACATCACTGAAGGAAGGCCTAAACTTAGAGCTTGGATTGAGGTATATGCTGCCATAGTCACTTCTCTTTAA 651 0.427 MATAFVKEILPPSLTSASSQPPLFDGTTRLYTSYQCPFAQRVWITRNYKGLQDKIKLVAIDLGDRPSWYKENVYPENKVPSLEHNGKVVGESLDLIKYVDANFEGPSLFPNDPAKREFGEKLVSEVDSVTRELFSSLKGDAVQQTSSVFDSLENALGKFDDGPFFLGQFSWVDIAYIPFIERFHIVLAEVFKHDITEGRPKLRAWIEVYAAIVTSL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120952g00003 216 SUPERFAMILY Thioredoxin-like 17 108 IPR036249 -
Stsc120952g00003 216 Gene3D Glutaredoxin 1 104 - -
Stsc120952g00003 216 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 209 IPR044629 GO:0004364
Stsc120952g00003 216 SFLD Main (cytGST) 29 207 - -
Stsc120952g00003 216 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Stsc120952g00003 216 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Stsc120952g00003 216 SUPERFAMILY GST C-terminal domain-like 103 210 IPR036282 -
Stsc120952g00003 216 SFLD Glutathione Transferase (cytosolic) 29 207 IPR040079 -
Stsc120952g00003 216 Gene3D - 105 214 - -
Stsc120952g00003 216 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Stsc120952g00003 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120952g00003 Stsc-Chr120952 29518 31876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120952g00003 1 207 Glutathione S-transferase Gene Family AT5G02790 68.750 1.04e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120952g00003 K00799 - gmx:100793025 337.035