Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120948g00012 ATGGAAGAAGATCAAGAGTCACACCCACAAAAGGGTCATCAAGAGGGATCAAGAAAGAAGATATGCATCAAGTTCAAGGTCATCACTACCACCATAGAAGAAGCTCATCATCATAACAAAAACAAGATCAAGAAGAATGAACATGATCTTGATCTCAGTGTGTGCTGTTTATGCCAGAAATCATTTGGTTCATGTAAAGCTCTAGCTGGACACATGAGGGTTCATAGCTTAGCCACTAAGAAACAACTAGTTTGTGATGCCAAACAAGGAACAACAAAGGATTCAGAAGAAAGTTCTAGACTTTCGGATACCCTTTTGAAGGGTTGGTCTGTAAGTTCCAAGAGAGGTAGAAAAGGTGTATCTTTTTGTGAAAAATCAGGTTCTGTTGGTGTCAATTTTGAACATGACATTGATGATGAGACTGAGATGCAAGAAGCAGCCAATGAACTAATGCTCTTAGCTACCGGATTCGCTATCGAATGCGAAGATTTCTCTAAGATTTCTGGCATCAACAAGCTCAAGAGGCTTAAGATTCAAGAGAAGAAGCTATCAAGCCCTGAAGAAGGGTTTGCAACGGTTTCGGATTCTCAAGCTTCTAATGGCAGCATTGTTGGCATCAAGAAGAAGAAAGGGATAAAGAAAATGAAGTTAACTGAATTAAGAACAGTTGAGGAGAAGAAGAAGAAGAAGAAAGATTCAAATAACATTCAGAAAGTGGTGGTAGTATTGAAGGAAGAACATCAAGACAGTGTTGTTGTTCATGAATCTCATGAAAATGGGGATGAGAATTATTGTCCCAAGATTTTGAGTTTTGATCTTAATGAGGTTCCAGCTATGGATGAAGAAGAAGGAGGTGTTACTGTTCAATCAGAGTTAGTTATGGCATCATCATCATCATCAAGTTATGCTTCTTCCCAAAGTTCAGTTACTCATTGGTGA 939 0.3866 MEEDQESHPQKGHQEGSRKKICIKFKVITTTIEEAHHHNKNKIKKNEHDLDLSVCCLCQKSFGSCKALAGHMRVHSLATKKQLVCDAKQGTTKDSEESSRLSDTLLKGWSVSSKRGRKGVSFCEKSGSVGVNFEHDIDDETEMQEAANELMLLATGFAIECEDFSKISGINKLKRLKIQEKKLSSPEEGFATVSDSQASNGSIVGIKKKKGIKKMKLTELRTVEEKKKKKKDSNNIQKVVVVLKEEHQDSVVVHESHENGDENYCPKILSFDLNEVPAMDEEEGGVTVQSELVMASSSSSSYASSQSSVTHW 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120948g00012 312 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Stsc120948g00012 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120948g00012 Stsc-Chr120948 89253 90191 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc120948g00012 AHD 0.00011 CL0665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120948g00012 - - vra:106765955 90.5077