Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120947g00011 ATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATAAAGAGGGTTTTCACTCACCACTCCAAGGAGAAGCAGCAGGATTTAGAGAACAAAAGCTCGAAAGAGAAGAAGAAGAAAGGCCTCGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAGCCGAGCAGCATTGAGAAAATCTTTGGCGACTTTGAAAGAGAGCAACAACTACTATCTGTAAGGCCTTCAACGCCTCTCGAGCAACCGAAGCAACCACCACCGCTGCCGCCACCTGTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCAACTCCAAAGGCTCCTTCTCCGCGCGCAACCTCTCCCAAAGCTACTTCTTCCAGGATTGTTCATCACCACAAGGAGGTTGGCTATAGACCGGAACCAACTTTAAGGAACCAACATGCCGCGGCGTCTAAGATCCAGGCTGTTTATAGAGGCTATATGGCCAGGAGGAGTTTTAGAGCTCTGAAGGGATTGGTGAGGCTTCAAGGCGTGGTAAGAGGACAGAACGTGAAGAGGCAGACGGTTAACGCCATGAAACATATGCAGCTTCTGGTGCGAGTTCAGTCTCAAATTCAATCTCGAAGGATTCAGATGCTAGAAAACCAGGCGCGATATCAAGCTGAGTTAAGGAATGACAAGGATGTTGCTAGCACCTTGGGCAAATTGACTTCTGAGAATGAAGACTGGGATGATAGCTTACTGACAAAAGAGGAAATTGAGGCAAGGCTACAGAGGAAGGTAGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATACTCTCATCAGTCATGGAAATCCACTCCAAAATCATCTCAGACGCCGATGACAGACTTGCGATCCGGCGGATTCCCATGGTGGTGGAACTGGTTGGAGAGACAGGTGCCGGCCTCAGCCTCGGCCTCATCAAATCCACAAGAGAAACAATCCCTCAAGAACTTCCAAATCACACCTCCAAGACCATACTCAGAGCAGAAGACTAGTCCTAAACCTGCCTCAACCAGCACCCCCCGGCAGCAGCAGCAGCAGCAGCAGCAGCATTTCGCCTTCGATAACATGGACATACCGACACCGAAATCCACGAAATCAACCATACTCCCATCTTCAAGGCCTTCTAGAACTCCACCATACAGAACTCCACAACCACCAACCATGTCAAAGTATTCAAGAGCCTTCGACGTGCCTCTAAAGGACGACGATAGCCTGACAAGTTGTCCACCATTTTCAGTGCCGAATTACATGGCTCCGACCGTTTCGGCTAAGGCCAAAGTCCGGGCGAATAGCAATCCTAGAGACAGGTTTGGTGGTGGTGGAACTCCAACAAGTGATTCAAAGAGGAGACTGTCATTCCCTTTCACACAAGGGAACATGAGTGTGGATTCAACTGTTTCTTTGCCTGCTACCATGGGGAGAAAGCCTTTTCAAAGATTTGTGTGA 1503 0.4917 MGKKGSWFSAIKRVFTHHSKEKQQDLENKSSKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLSVRPSTPLEQPKQPPPLPPPVVPPRAASPRAPSPRAPSPRAATPKAPSPRATSPKATSSRIVHHHKEVGYRPEPTLRNQHAAASKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAELRNDKDVASTLGKLTSENEDWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQSWKSTPKSSQTPMTDLRSGGFPWWWNWLERQVPASASASSNPQEKQSLKNFQITPPRPYSEQKTSPKPASTSTPRQQQQQQQQHFAFDNMDIPTPKSTKSTILPSSRPSRTPPYRTPQPPTMSKYSRAFDVPLKDDDSLTSCPPFSVPNYMAPTVSAKAKVRANSNPRDRFGGGGTPTSDSKRRLSFPFTQGNMSVDSTVSLPATMGRKPFQRFV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120947g00011 500 SMART iq_5 152 174 IPR000048 GO:0005515
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 71 137 - -
Stsc120947g00011 500 ProSiteProfiles IQ motif profile. 153 181 IPR000048 GO:0005515
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 320 410 - -
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 82 118 - -
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 445 472 - -
Stsc120947g00011 500 Pfam IQ calmodulin-binding motif 154 174 IPR000048 GO:0005515
Stsc120947g00011 500 PANTHER IQ-DOMAIN 5-RELATED 1 475 - -
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 14 34 - -
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 1 55 - -
Stsc120947g00011 500 MobiDBLite consensus disorder prediction 320 394 - -
Stsc120947g00011 500 Pfam Protein of unknown function (DUF4005) 391 479 IPR025064 -
Stsc120947g00011 500 Gene3D - 151 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120947g00011 Stsc-Chr120947 75768 79334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120947g00011 1 499 IQD Protein Family AT3G59690 49.113 4.35e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120947g00011 - - gmx:100814804 663.685