Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120947g00001 ATGTTGATGATTTTTGCCGTTGAAACCAAACATCCTTTTAACATTTCCTGTTGTTTCTGTAACCAGGAGAGGAAAGAGAAGCTTAGTGAACGAATCGTCGCGTTGCAGCAGCTTGTTTCGCCATATGGCAAGACAGATACATCTTCTGTCTTAGAGGAAGCAATGCAATACATAGGTTTCCTTCATAAACAAGTTAAGCTTCTTAGTGCCCCTTACCTCGAAAGTTCGGCGGCAACCAAGAATCCGGGTTTGGAGCCATGCAGCCTGAGGAGTAGAGGGTTGTGTCTTGTTCCGGTCTCACTAACAATTGGAGTTGCTGAGAGCAATGGTGCGGATATCTGGGCTCCCATCAAGACTACTACTTCGCCGCCGAAATTTCCGTCGTAA 387 0.4599 MLMIFAVETKHPFNISCCFCNQERKEKLSERIVALQQLVSPYGKTDTSSVLEEAMQYIGFLHKQVKLLSAPYLESSAATKNPGLEPCSLRSRGLCLVPVSLTIGVAESNGADIWAPIKTTTSPPKFPS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120947g00001 128 CDD bHLH_AtbHLH_like 22 69 IPR045239 -
Stsc120947g00001 128 Gene3D - 20 81 IPR036638 GO:0046983
Stsc120947g00001 128 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 74 IPR036638 GO:0046983
Stsc120947g00001 128 FunFam Transcription factor bHLH113 family 11 86 - -
Stsc120947g00001 128 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 102 - -
Stsc120947g00001 128 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 61 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120947g00001 Stsc-Chr120947 30 1483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120947g00001 18 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 64.220 7.64e-47 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120947g00001 - - ahf:112715472 203.756