Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120946g00005 ATGGCTTCTCCAATTAGTGGAGGCTATTCAGGTTCTGGCTCTGGCTCTGGCTCTGAGGGAGACCCTCAGCAGCATATAATGGATCAAAGGAAGAGGAAGAGAATGCAGTCAAATAGGGAATCAGCAAGGAGATCAAGGATGAGGAAGCAGCAGCATCTTGATAGCCTGATTTCTCAGGCTGATGAGCTCAAGAAGGAGAACAGCCAGATCAGCACAAGCATTGGGATCACCACTGAGCTTTACCTCAACATTGAATCTGATAATGCAATCTTGAGGGCTCAGATGGCTGAACTTACCAACAGGTTGAACTCTCTCAATGATATCATCAATTACATGAACTCATCAATGTCTATCACCACCACCACCACCAATAACCACCACTTTCTTGCTGCTACTCATCATGAGGCTCAGGAGACTCATTTCAATGATTGTGGCTTCATGGACCCTTGGAACTCTCTGGCTGCTAATCAACCAATCATGGACATGTTGATGTATTGA 498 0.4538 MASPISGGYSGSGSGSGSEGDPQQHIMDQRKRKRMQSNRESARRSRMRKQQHLDSLISQADELKKENSQISTSIGITTELYLNIESDNAILRAQMAELTNRLNSLNDIINYMNSSMSITTTTTNNHHFLAATHHEAQETHFNDCGFMDPWNSLAANQPIMDMLMY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120946g00005 165 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Stsc120946g00005 165 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 74 IPR004827 GO:0003700|GO:0006355
Stsc120946g00005 165 MobiDBLite consensus disorder prediction 1 51 - -
Stsc120946g00005 165 FunFam BZIP transcription factor 28 79 - -
Stsc120946g00005 165 Coils Coil 46 73 - -
Stsc120946g00005 165 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Stsc120946g00005 165 Pfam bZIP transcription factor 30 85 IPR004827 GO:0003700|GO:0006355
Stsc120946g00005 165 MobiDBLite consensus disorder prediction 24 51 - -
Stsc120946g00005 165 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Stsc120946g00005 165 Gene3D - 28 83 - -
Stsc120946g00005 165 MobiDBLite consensus disorder prediction 1 23 - -
Stsc120946g00005 165 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Stsc120946g00005 165 Coils Coil 81 108 - -
Stsc120946g00005 165 PANTHER BZIP TRANSCRIPTION FACTOR 44 11 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120946g00005 Stsc-Chr120946 16862 17359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120946g00005 23 115 bZIP Transcription Factor Family AT4G34590 60.215 3.01e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc120946g00005 bZIP_1 3.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120946g00005 K25786 - gmx:778139 163.31