Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120944g00023 ATGGCGAAGAAGAACAAAGCTAGGGTTCCCGACGACCAACAACAAACCGATTCTGAACCTAACAACAACCATCAGACCCTCTACCAGGTTCTTGGTGTGGAAAGAACTGCCTCTCAGCAGGAAATAAAGAAGGCATACTACAAGCTCGCATTGCGACTTCATCCTGACAAGAACCCTGGCGATGAGGAAGCTAAAGAGAAGTTTCAGCAACTGCAAAAAGTAATCTCAATTCTTGGGGATGAAGAGAAACGAGCCCTTTATGATCAGACTGGTTGTGTTGATGATGTGGACCTTTCTAGTGATGCTGTTCAGAATCTTAGTGAGTTTTTCAGAACAATGTATAAGCAGGTAACTGAAGCTGATATTGAGGAGTTTGAAGCTAACTATAGGGGATCTGACTCAGAAAAAAATGACCTAATTGATCTGTACAAGAAATGCAAGGGTAATATGGACAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAATTTGATTCACATCGATTCAAGGATATACTTGATGAGGCCATTGCTGCTGGGGAACTAAAGGAAACAAAAGCCTACCAAAAATGGGCGAAGAAAGTATCAGAAATCAAACCACCAACTAGTCCTTTAAAGAGGAGGGCAGAGTCCAGTAAGAAGGCAGAAACAGATCTATATGCAATGATAGCACAACGTCAAAATCAGAGGAAAGATCGGTTTGATTCAATGTTCTCATCACTGGCTTCAAAATACGGTGGAGGTGATATGCCCGAGCCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGCTGGATAGTGGAAGATCCTCAAAAAAGGCAAAGCAATCAAAGCGGAAGTAA 843 0.4199 MAKKNKARVPDDQQQTDSEPNNNHQTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDVDLSSDAVQNLSEFFRTMYKQVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMDRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKETKAYQKWAKKVSEIKPPTSPLKRRAESSKKAETDLYAMIAQRQNQRKDRFDSMFSSLASKYGGGDMPEPSEEEFEAAQRKLDSGRSSKKAKQSKRK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120944g00023 280 PRINTS DnaJ domain signature 83 102 IPR001623 -
Stsc120944g00023 280 PRINTS DnaJ domain signature 63 83 IPR001623 -
Stsc120944g00023 280 PRINTS DnaJ domain signature 28 46 IPR001623 -
Stsc120944g00023 280 PRINTS DnaJ domain signature 46 61 IPR001623 -
Stsc120944g00023 280 MobiDBLite consensus disorder prediction 256 272 - -
Stsc120944g00023 280 CDD DnaJ 26 80 IPR001623 -
Stsc120944g00023 280 Gene3D DnaJ domain 8 109 IPR036869 -
Stsc120944g00023 280 Pfam DnaJ domain 27 88 IPR001623 -
Stsc120944g00023 280 SUPERFAMILY Chaperone J-domain 24 98 IPR036869 -
Stsc120944g00023 280 SMART dnaj_3 25 83 IPR001623 -
Stsc120944g00023 280 MobiDBLite consensus disorder prediction 1 25 - -
Stsc120944g00023 280 MobiDBLite consensus disorder prediction 242 280 - -
Stsc120944g00023 280 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Stsc120944g00023 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 276 IPR042977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120944g00023 Stsc-Chr120944 91977 95627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120944g00023 28 88 C2H2 Transcription Factor Family AT1G74250 39.394 5.64e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120944g00023 K09529 - gmx:100781463 438.728