Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120944g00022 ATGGCGAAGAAGAACAAAGCTAGGGTTCCCGACGACCAACAACAAACCGATTCTGAACCTAACAACAACCATCAGACCCTCTACCAGGTTCTTGGTGTGGAAAGAACTGCCTCTCAGCAGGAAATAAAGAAGGCATACTACAAGCTCGCATTGCGACTTCATCCTGACAAGAACCCTGGCGATGAGGAAGCTAAAGAGAAGTTTCAGCAACTGCAAAAAGTAATCTCAATTCTTGGGGATGAAGAGAAACGAGCCCTTTATGATCAGACTGGTTGTGTTGATGATGTGGACCTTTCTAGTGATGCTGTTCAGAATCTTAGTGAGTTTTTCAGAACAATGTATAAGCAGGTAACTGAAGCTGATATTGAGGAGTTTGAAGCTAACTATAGGGGATCTGACTCAGAAAAAAATGACCTAATTGATCTGTACAAGAAATGCAAGGGTAATATGGACAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAATTTGATTCACATCGATTCAAGGATATACTTGATGAGGCCATTGCTGCTGGGGAACTAAAGGAAACAAAAGCCTACCAAAAATGGGCGAAGAAAGTATCAGAAATCAAACCACCAACTAGTCCTTTAAAGAGGAGGGCAGAGTAG 633 0.4171 MAKKNKARVPDDQQQTDSEPNNNHQTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDVDLSSDAVQNLSEFFRTMYKQVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMDRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKETKAYQKWAKKVSEIKPPTSPLKRRAE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120944g00022 210 CDD DnaJ 26 80 IPR001623 -
Stsc120944g00022 210 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 209 IPR042977 -
Stsc120944g00022 210 SUPERFAMILY Chaperone J-domain 24 98 IPR036869 -
Stsc120944g00022 210 SMART dnaj_3 25 83 IPR001623 -
Stsc120944g00022 210 MobiDBLite consensus disorder prediction 1 25 - -
Stsc120944g00022 210 Gene3D DnaJ domain 10 106 IPR036869 -
Stsc120944g00022 210 Pfam DnaJ domain 27 88 IPR001623 -
Stsc120944g00022 210 PRINTS DnaJ domain signature 46 61 IPR001623 -
Stsc120944g00022 210 PRINTS DnaJ domain signature 83 102 IPR001623 -
Stsc120944g00022 210 PRINTS DnaJ domain signature 28 46 IPR001623 -
Stsc120944g00022 210 PRINTS DnaJ domain signature 63 83 IPR001623 -
Stsc120944g00022 210 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120944g00022 Stsc-Chr120944 91938 94905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120944g00022 28 88 C2H2 Transcription Factor Family AT1G74250 39.394 2.58e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120944g00022 K09529 - gmx:100793909 355.91