Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120944g00012 ATGGATTCTTTCTATATCTTCTCCTCCTCCCTAGTTCTGTTCATTTTTACTCTACTTATGATCAAGTTCCATAGCATAACAAGAACCTCAAATTCCAGCAGCGGCAATAAGCTACCATCTCCACCATCACTACCAATAATTGGACACCTTCATCTTCTAGGCTCAGTGATACCAAAGTCATTTGAAGCCTTGGCAAGAATCTATGGCCCTCTGATTCAGCTTCGTTTAGGTGCCTCAACTTGCATAGTTGTTTCCAATGCCCAAGTTGCAAGAGAAGTAATGAAAACACATGAACTCAACTTCTGCTACCGCCCCAACTTCGGTTCCTCTGAGTATTTTCTTTACAAAGGCTCTTACTTCATTACTGCACCATATGGCCCTTATTGGAGGTTCATGAAGAAGCTATGTGTCACTCAACTTCTCTCCAGTTCTCAGCTTGGGAGATTCATGCACATAAGGGAGCAAGAGATTAAGAAGCTCTTGAAATCACTCATGGTTTGTTCTAAAGAGGGCAGAGAGTGTGACTTGGGTTTTGAGCTTACTACTTTGACCAACAATATCCTATGTAGGATGGCCATGAGCACTACCACTTGTTTGGACAATGATGATGCTGTGGAGATTCATGGTTTGGTTAAGGAGTTTTTAGAAGTTGGTGCTAAGTTGAGCATTGGTGAGGTTTTTGGGCGTTTGGGGAAGCTTGATTTGTTTGGATATGGGAAGAAGCTTGTGAAAATAGTGGCCAAATTTGACTGCATCTTGGAGAGGATCATGGAGGAACATGAACATGGAGATGGTTGTGATGATGATGAAGAAAGTACCTTGGACATGATGTATATTCTGTTGAGAGTTTATAGGGATCCAAACGCTCAGGTGAGGTTGACAAGGAATGACATCAAGGCCTTCTTCCTAGATATTTTTCTTGCGGGAACAGACACCTCTTCAGTGGCATTGCAATGGAGCATGGCAGAGATACTAAACCACCCAACAATACTGAAGAAGCTAAAGGCAGAGATTGATGGTGTGGTTGGGTCAACCAGGTTGGTCAACGAATCGGACGTTCCAAATCTGCCTTACCTCCAAGCTGTTGTGAAGGAAGTGCTTAGGCTCCATCCAACGGCACCCTTTGCTCTTAGACAATCTTCTGAAGACTGCATCATCAATGGTTTTTATGTTAAGGCTCAAACAAGAACACTCATCAATGTCTATGCCATCATGAGAGACCCGCAATCTTGGCACAATCCTCAAGATTTTATCCCCGAAAGGTTCTTGGATCATGACCAAGCTAACGACATTATCAAAACGAGTGTTAACGATTTTAGGTACTAA 1326 0.4268 MDSFYIFSSSLVLFIFTLLMIKFHSITRTSNSSSGNKLPSPPSLPIIGHLHLLGSVIPKSFEALARIYGPLIQLRLGASTCIVVSNAQVAREVMKTHELNFCYRPNFGSSEYFLYKGSYFITAPYGPYWRFMKKLCVTQLLSSSQLGRFMHIREQEIKKLLKSLMVCSKEGRECDLGFELTTLTNNILCRMAMSTTTCLDNDDAVEIHGLVKEFLEVGAKLSIGEVFGRLGKLDLFGYGKKLVKIVAKFDCILERIMEEHEHGDGCDDDEESTLDMMYILLRVYRDPNAQVRLTRNDIKAFFLDIFLAGTDTSSVALQWSMAEILNHPTILKKLKAEIDGVVGSTRLVNESDVPNLPYLQAVVKEVLRLHPTAPFALRQSSEDCIINGFYVKAQTRTLINVYAIMRDPQSWHNPQDFIPERFLDHDQANDIIKTSVNDFRY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120944g00012 441 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 Pfam Cytochrome P450 39 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 Gene3D Cytochrome P450 23 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00012 441 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 426 - -
Stsc120944g00012 441 SUPERFAMILY Cytochrome P450 34 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120944g00012 Stsc-Chr120944 32093 34322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120944g00012 14 441 Cytochrome P450 AT2G42250 51.620 3.86e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120944g00012 - - gmx:106794180 582.022