Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120944g00011 ATGGATTCTTTCTATATCTTCTCCTCCTCCCTAGTTCTGTTCATTTTTACTCTACTTATGATCAAGTTCCATAGCATAACAAGAACCTCAAATTCCAGCAGCGGCAATAAGCTACCATCTCCACCATCACTACCAATAATTGGACACCTTCATCTTCTAGGCTCAGTGATACCAAAGTCATTTGAAGCCTTGGCAAGAATCTATGGCCCTCTGATTCAGCTTCGTTTAGGTGCCTCAACTTGCATAGTTGTTTCCAATGCCCAAGTTGCAAGAGAAGTAATGAAAACACATGAACTCAACTTCTGCTACCGCCCCAACTTCGGTTCCTCTGAGTATTTTCTTTACAAAGGCTCTTACTTCATTACTGCACCATATGGCCCTTATTGGAGGTTCATGAAGAAGCTATGTGTCACTCAACTTCTCTCCAGTTCTCAGCTTGGGAGATTCATGCACATAAGGGAGCAAGAGATTAAGAAGCTCTTGAAATCACTCATGGTTTGTTCTAAAGAGGGCAGAGAGTGTGACTTGGGTTTTGAGCTTACTACTTTGACCAACAATATCCTATGTAGGATGGCCATGAGCACTACCACTTGTTTGGACAATGATGATGCTGTGGAGATTCATGGTTTGGTTAAGGAGTTTTTAGAAGTTGGTGCTAAGTTGAGCATTGGTGAGGTTTTTGGGCGTTTGGGGAAGCTTGATTTGTTTGGATATGGGAAGAAGCTTGTGAAAATAGTGGCCAAATTTGACTGCATCTTGGAGAGGATCATGGAGGAACATGAACATGGAGATGGTTGTGATGATGATGAAGAAAGTACCTTGGACATGATGTATATTCTGTTGAGAGTTTATAGGGATCCAAACGCTCAGGTGAGGTTGACAAGGAATGACATCAAGGCCTTCTTCCTAGATATTTTTCTTGCGGGAACAGACACCTCTTCAGTGGCATTGCAATGGAGCATGGCAGAGATACTAAACCACCCAACAATACTGAAGAAGCTAAAGGCAGAGATTGATGGTGTGGTTGGGTCAACCAGGTTGGTCAACGAATCGGACGTTCCAAATCTGCCTTACCTCCAAGCTGTTGTGAAGGAAGTGCTTAGGCTCCATCCAACGGCACCCTTTGCTCTTAGACAATCTTCTGAAGACTGCATCATCAATGGTTTTTATGTTAAGGCTCAAACAAGAACACTCATCAATGTCTATGCCATCATGAGAGACCCGCAATCTTGGCACAATCCTCAAGATTTTATCCCCGAAAGGTTCTTGGATCATGACCAAGCTAACGACATTATCAAAACGAGTGTTAACGATTTTAGGTACATTCCGTTTGGGTTTGGGAGGAGAGGATGCCCCGGATCCAGTCTTGCTTTAACGGTAATACAAGCAACAATTGCAGCGTTGATACAATGTTTTGAGTGGAAAATCAAAGGGGGAGACAGGGTTAACATGGAAGAAGGCTCATCATTCTCTGCAGGGTTGGCTAAGCCACTACTGTGTTACCCTATCATATCTTATAATCCCTTTTCACTGTGA 1536 0.4303 MDSFYIFSSSLVLFIFTLLMIKFHSITRTSNSSSGNKLPSPPSLPIIGHLHLLGSVIPKSFEALARIYGPLIQLRLGASTCIVVSNAQVAREVMKTHELNFCYRPNFGSSEYFLYKGSYFITAPYGPYWRFMKKLCVTQLLSSSQLGRFMHIREQEIKKLLKSLMVCSKEGRECDLGFELTTLTNNILCRMAMSTTTCLDNDDAVEIHGLVKEFLEVGAKLSIGEVFGRLGKLDLFGYGKKLVKIVAKFDCILERIMEEHEHGDGCDDDEESTLDMMYILLRVYRDPNAQVRLTRNDIKAFFLDIFLAGTDTSSVALQWSMAEILNHPTILKKLKAEIDGVVGSTRLVNESDVPNLPYLQAVVKEVLRLHPTAPFALRQSSEDCIINGFYVKAQTRTLINVYAIMRDPQSWHNPQDFIPERFLDHDQANDIIKTSVNDFRYIPFGFGRRGCPGSSLALTVIQATIAALIQCFEWKIKGGDRVNMEEGSSFSAGLAKPLLCYPIISYNPFSL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120944g00011 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Stsc120944g00011 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 FunFam Cytochrome P450 family protein 29 500 - -
Stsc120944g00011 511 CDD CYP93 69 502 - -
Stsc120944g00011 511 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 491 - -
Stsc120944g00011 511 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00011 511 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120944g00011 Stsc-Chr120944 32093 34322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120944g00011 7 509 Cytochrome P450 AT2G42250 50.195 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120944g00011 - - gmx:106794180 691.034