Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120944g00009 ATGGGTGGTAGTAGTTATGATTACAAAGATTACATTCAATTTTTCATGATATGGCTAGTCTCCACAATCATAGTTAGAGCTATACTCAACAGAAAACAGAACAAGTCTCATAATAAACCACCAAGTCCACTGTCACTTCCTATAATTGGACACCTTCACCTTCTTGCTCCAATTCCTCACCAAGCTCTTCACAAACTCTCAATCCGCTATGGACCCATAATGCACATTAAACTTGGTTCTGTCCCTTGTGTAGTAGCTTCCACACCAGAATCCGCAAAAGAATTCCTCAAGACTCATGAATCTTCCTTCTCAAACCGGCCTCGAAATCTAGCTGTTGATTATCTTACATATGGTTCTCAAGACTTCTCCTTCGCCCCCTATGGACCTTACTGGAAATTCATGAAGAAGATTTGCATGTCTGAACTTCTCGGCGGCCACACGCTAAACCAGCTTTTACCATTGAGGAGGCAAGAGACAGACAGATTCTTGAGGCTATTGCTTAAGAGAGGGATGGCTGGTGAGGCTGTTAATGTTGAAGGAGAGCTATTGACGCTTTCGAATAATGTTATCTCAAGGATGATCATGAGCAAGACACATATGGAAGATGAAGCTGAGGCTGAGGAGGTGAGAAAGCTGGTGCAGGACACGGCTGAGCTTACTGGGAAGTTCAATGCTTCGGATTACATTTGGTTCCTCAAGAACTGGGACTTGCAGGGCTTTAGAGAAAGAGTTGAGGAGATTCGGAACAGGTTTGATTCCATGACAGAGAGAGTGATCAAGGAGCATCAAGAAGAAAGGATGAAGCAGAAGAAAGAAGGAGAAGATGGTGAAATCAAGGACCTACTTGATATACTATTGGACATACATGAAGATCACAACTCTGAGATACGTTTGACTAAAGAGAACATCAAGGCCTTCATCTTGGACATATTTATAGCAGGAACAGATACTTCAGCATTAACTATAGAGTGGGCTCTAGCTGAGTTGATCAATAACCCTCATGTGATGGAGAGGGCAAGGGAAGAGATAAAAGATGTGGTTGGAAATAATAGAATAGTACAAGAATCAGACATTGTCAACCTTCCTTATCTTCAAGCTATAGTCAAAGAAACACTGAGACTTCACCCAACAGGTCCAATGACAGTTAGAGAATCATCTGAGAGCTGCACCATATGGGGCTATGAGATTCCAGCGAATACACAGTTGTTTGTTAATATTTGGGCCATTGGAAGGGACCCAAATTATTGGGAAAACCCACTGGAGTTCAAGCCAGAAAGGTTTCTTACTGGGACGAGCCAGTTAGATGTAAGGGGGCAACACTTCCATATGATTCCATTTGGGAGTGGCAGAAGAGGATGCCCTGGAACATCACTAGCTTTGCAAGTTGTTCAAGCTAACCTTGGTGCAATGGTGCAGTGCTTTGAATGGAAGGTTAATTGCAGTGCCAATAATGAGATTGTTGACATGGAAGAGAAACCAGGGTTAACTCTTTCAAGGACTCATCCCTTGATTTGTGTCCCCATGCCTAGACTTAGTCCTTTTCCTCCCATATGA 1554 0.4279 MGGSSYDYKDYIQFFMIWLVSTIIVRAILNRKQNKSHNKPPSPLSLPIIGHLHLLAPIPHQALHKLSIRYGPIMHIKLGSVPCVVASTPESAKEFLKTHESSFSNRPRNLAVDYLTYGSQDFSFAPYGPYWKFMKKICMSELLGGHTLNQLLPLRRQETDRFLRLLLKRGMAGEAVNVEGELLTLSNNVISRMIMSKTHMEDEAEAEEVRKLVQDTAELTGKFNASDYIWFLKNWDLQGFRERVEEIRNRFDSMTERVIKEHQEERMKQKKEGEDGEIKDLLDILLDIHEDHNSEIRLTKENIKAFILDIFIAGTDTSALTIEWALAELINNPHVMERAREEIKDVVGNNRIVQESDIVNLPYLQAIVKETLRLHPTGPMTVRESSESCTIWGYEIPANTQLFVNIWAIGRDPNYWENPLEFKPERFLTGTSQLDVRGQHFHMIPFGSGRRGCPGTSLALQVVQANLGAMVQCFEWKVNCSANNEIVDMEEKPGLTLSRTHPLICVPMPRLSPFPPI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120944g00009 517 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 FunFam Cytochrome P450 family protein 31 505 - -
Stsc120944g00009 517 SUPERFAMILY Cytochrome P450 40 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 Pfam Cytochrome P450 40 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 Gene3D Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 CDD CYP93 71 507 - -
Stsc120944g00009 517 Coils Coil 237 257 - -
Stsc120944g00009 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Stsc120944g00009 517 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120944g00009 517 PANTHER CYTOCHROME P450 98A9 16 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120944g00009 Stsc-Chr120944 26559 28229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120944g00009 7 510 Cytochrome P450 AT5G06900 49.209 9.01e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120944g00009 K24188 - gmx:100779342 823.542