Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120944g00001 ATGGGTTCGAGAGTTAAGAGCAGCAACCAAGTTGAACCACTTCAACAACAACACACTCATCATCATCATCAAATACATCAAGACCACGAAATCTCTTTCGGGATGATGCAATCTCCATCATCATCATCCTCTATCATCCCTGGAAACTGCAACTTCTTAAACAAGGATTCAGGTGGTGGAGCTTATGATTTGGGGGAACTTGACCAAGCCCTTTTTCTCTACCTGGATGGACAAGCACAAGCCGATCCCTCAAATACTCTTCATCATCATCAAGACCAAAGACAGAAATCATCATCATCATCAGGAGCAGCGAGGCCTCATACTCTCAACATATTCCCGTCTGAGCCTATGCATGTTCATCCATCATCATCCAATTCCAAGCTCACCATGGAATTAGTTTCTCCACAAGGCAATGCTCCCAAGCGACCCACCATAGAGTTGCCCAAACCAATAACAAACGAACCTGCTTCTGCAGCCCTCACTCCTCACCCACCTAAACCGGCCAAGCGAGAGAGCAGTAACCGCAAGGGTCCAACCTCAAGTTCTGAACACGAAGGACCCAAAACACCAGATCCCAAGACACTGAGAAGGCTTGCTCAGAATAGAGAGGCAGCTCGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCCAGTAGGATTAGGCTTAATCAGATTGAGCAAGAGCTACAGCGTGCTAGATCTCAAGGCATATTCTTGGGTGGAAGTGCAGTTATGGGTGGAGAACAAGGTTTTCCAGTGGGTATTAATGGCATAAGCACAGAGGCTGCAATGTTTGACGTAGAATATGCAAGATGGCTAGAGGAGCACCACCGCCTAGTGTGCGAGCTGAGGGCGGCGGTGCAAGAACACCTACCTGACAACGAGCTCAGACTCTTTGTCGAGAATTTCTTGGCGCATTACGACCAAGTTATGAACCTCAAGGGTTTAGTGGCCAGAACCGACGTCTTCCACCTTGTTTCAGGCATGTGGAAAACTCCCGCCGAGCGTTGCTTCATGTGGATCGGTGGATTCAGGCCCTCAGAACTCATCAAGATTATTGTGAGTCAGATAGAGCCTCTGACGGAGCAACAAATAGTTGGGATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCTCTCTCCCAAGGCCTTGAGGCTCTCAATCAATCTCTTTTGAACACTATCACATCAGACTCTCTGAGCTCTCCTCCTGTTATGGCTAACTACATGGGACAGATGGCTCTCGCCATGAACAAGCTCGCTACCCTTGAAGGTTTTGTCAAACAGGCAGATAATCTACGGCAGCAAACGGTGCACCGGCTGCATGAGATCCTAACGACGCGGCAGGCGGCGAGGTGTTTTCTGGCGATAGCGGAGTACTTCCATCGCCTGAGAGCCCTGAGTTCTCTCTGGTTGTCCCGCCCTCGCCAAGATCATTAG 1458 0.4897 MGSRVKSSNQVEPLQQQHTHHHHQIHQDHEISFGMMQSPSSSSSIIPGNCNFLNKDSGGGAYDLGELDQALFLYLDGQAQADPSNTLHHHQDQRQKSSSSSGAARPHTLNIFPSEPMHVHPSSSNSKLTMELVSPQGNAPKRPTIELPKPITNEPASAALTPHPPKPAKRESSNRKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQIEQELQRARSQGIFLGGSAVMGGEQGFPVGINGISTEAAMFDVEYARWLEEHHRLVCELRAAVQEHLPDNELRLFVENFLAHYDQVMNLKGLVARTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQIVGICGLQQSTQEAEEALSQGLEALNQSLLNTITSDSLSSPPVMANYMGQMALAMNKLATLEGFVKQADNLRQQTVHRLHEILTTRQAARCFLAIAEYFHRLRALSSLWLSRPRQDH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120944g00001 485 Gene3D - 192 243 - -
Stsc120944g00001 485 MobiDBLite consensus disorder prediction 1 15 - -
Stsc120944g00001 485 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
Stsc120944g00001 485 MobiDBLite consensus disorder prediction 168 196 - -
Stsc120944g00001 485 CDD bZIP_HBP1b-like 193 245 - -
Stsc120944g00001 485 SMART brlzneu 189 275 IPR004827 GO:0003700|GO:0006355
Stsc120944g00001 485 MobiDBLite consensus disorder prediction 117 133 - -
Stsc120944g00001 485 ProSiteProfiles DOG1 domain profile. 266 480 IPR025422 GO:0006351|GO:0043565
Stsc120944g00001 485 MobiDBLite consensus disorder prediction 82 196 - -
Stsc120944g00001 485 PANTHER TRANSCRIPTION FACTOR TGA9 109 483 - -
Stsc120944g00001 485 Pfam bZIP transcription factor 193 221 IPR004827 GO:0003700|GO:0006355
Stsc120944g00001 485 SUPERFAMILY Leucine zipper domain 194 236 IPR046347 GO:0003700|GO:0006355
Stsc120944g00001 485 Coils Coil 212 239 - -
Stsc120944g00001 485 MobiDBLite consensus disorder prediction 1 28 - -
Stsc120944g00001 485 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 191 235 IPR004827 GO:0003700|GO:0006355
Stsc120944g00001 485 FunFam BZIP family transcription factor 192 241 - -
Stsc120944g00001 485 Pfam Seed dormancy control 284 359 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120944g00001 Stsc-Chr120944 3540 8821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120944g00001 51 484 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.726 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc120944g00001 DOG1 4.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120944g00001 K14431 - gmx:100799713 695.271