Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120943g00001 ATGCAATCCAAGTTTCGTGTGTCGACCCCATTTCTGTCGCAAATGGCCGCCGCTGACAACACCGCCACCAAGCCAAGGGATTATTACAAAGTGTTGGAGGTTGATTATGATGCAACTGATGAAAACATCAAATTAAATTACCGAAGACTTGCATTGAAATGGCATCCTGACAAGCATAAAGGTGACAGTGCAGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTGTTGAGTGATCCTGCCAAGCGTTGTGACTATGATTTAACTGGAGCCTGTGAGATCGAAAAGTATAGCTTGCAGGAATACCTTGCCAGATTTAAAGGCATGATTCTTACTTGCAATGGACTTGGCATCAACCAGACAGACCGATGGTCACCACATTTGATTGAAAGTATTGATTCCTTAGATGAGTAA 420 0.4167 MQSKFRVSTPFLSQMAAADNTATKPRDYYKVLEVDYDATDENIKLNYRRLALKWHPDKHKGDSAVTAKFQEINEAYNVLSDPAKRCDYDLTGACEIEKYSLQEYLARFKGMILTCNGLGINQTDRWSPHLIESIDSLDE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120943g00001 139 PRINTS DnaJ domain signature 64 84 IPR001623 -
Stsc120943g00001 139 PRINTS DnaJ domain signature 84 103 IPR001623 -
Stsc120943g00001 139 PRINTS DnaJ domain signature 29 47 IPR001623 -
Stsc120943g00001 139 PRINTS DnaJ domain signature 47 62 IPR001623 -
Stsc120943g00001 139 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 20 123 - -
Stsc120943g00001 139 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Stsc120943g00001 139 SMART dnaj_3 26 84 IPR001623 -
Stsc120943g00001 139 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Stsc120943g00001 139 CDD DnaJ 27 81 IPR001623 -
Stsc120943g00001 139 SUPERFAMILY Chaperone J-domain 23 112 IPR036869 -
Stsc120943g00001 139 Gene3D DnaJ domain 12 106 IPR036869 -
Stsc120943g00001 139 FunFam Chaperone protein DNAj, putative 19 106 - -
Stsc120943g00001 139 Pfam DnaJ domain 27 89 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120943g00001 Stsc-Chr120943 4597 7020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120943g00001 18 89 C2H2 Transcription Factor Family AT1G74250 40.260 3.22e-11 57.8