Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120940g00011 ATGGAAATTTGCCATAGGGATCTCAAGCTGGAAAACACACTTTTAGATGGAAGCACAGCACCAAGGCTTAAAATATGCGACTTTGGTTACTCAAAGTCTTCTGTTCTGCACTCTCAGCCAAAATCCACAGTAGGAACCCCTGCATATATTGCTCCAGAGGTCTTGTCAAGAAGAGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACCTTGTATGTGATGCTCGTTGGTGCTTATCCTTTTGAAGACCCAGAAGACCCAAGAAACTTCAGAAAAACTCTTCAGCGAATCCTGAGTGTCCACTATTCCATTCCAGACTATGTTCGTGTAAGCAAAGAGTGTAGACACCTCCTATCTCGAATATTTGTTGCCAACCCTGAAAAGAGAATTACCATACCGGAGATAAAGATGCATTCATGGTTCCTACAGAATTTACCAGTAGAATTCATGGATGAGGGTGTAGGTGGGTTGCAAAATGGTGGTGCTGATCAGTATGATGATGATAGTTCAGGTCAGAGCATTGAAGAAATATTGTCAATAGTACAAGAGGCTCGGAAGCCAAGTGAGAATGGACCAAAAGTTGGTGGGCAGTTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGCAGATGCTGACATCGATGATTTTGAAACAAGCGGTGATTTTGTCTGCGCTTTGTGA 693 0.4315 MEICHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRVSKECRHLLSRIFVANPEKRITIPEIKMHSWFLQNLPVEFMDEGVGGLQNGGADQYDDDSSGQSIEEILSIVQEARKPSENGPKVGGQFVGGSMDLDDIDADADIDDFETSGDFVCAL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120940g00011 230 PANTHER SERINE/THREONINE KINASE 2 155 - -
Stsc120940g00011 230 Gene3D Transferase(Phosphotransferase) domain 1 1 150 - -
Stsc120940g00011 230 SUPERFAMILY Protein kinase-like (PK-like) 2 150 IPR011009 -
Stsc120940g00011 230 Pfam Protein kinase domain 2 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120940g00011 230 SMART serkin_6 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120940g00011 230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Stsc120940g00011 230 FunFam Serine/threonine-protein kinase SRK2A 1 152 - -
Stsc120940g00011 230 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120940g00011 Stsc-Chr120940 61001 62854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120940g00011 3 154 CBL-interacting serine-threonine protein kinases AT4G24400 44.304 1.34e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc120940g00011 Pkinase 8.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120940g00011 K14498 - gmx:100788662 400.208