Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120937g00010 ATGATAACTCTTGGAATAATCTCATTATTTTACAGGAACGAAAGTGAGGATATCGATCGAATTGTTGAACATATCACTGGTTTTCTAGGAAAGACATTCTTCTTTGTTGCTCAACATCCAGTTGGAGTGAATTCTCGTGTGGATCATGTGATCAAACTGTTAAACCACCGGAGATCAAAAGATGTTGGAGTATTAGGGATATCAGGAATTGGAGGCATTGGAAAAACAACCATTGCAAAAGCCACTTATAATAAGATTCATTGTGACTTTGAGACTTGGTGCTGTCTCTTAGATATCAAAGAAAAATGGAAGCAAATTACTTGCCAAGTTGATTTACAAAACCAACTTTTGTCTGATGTCTACGCAAATACTAAAATAAAGATAAGAGACATTGAATTAGGGAAGACTATTTTGAAGGAAAGACTTCAGCATAAAAGAATACTACTTATACTTGATGATGTTGATGACTTAGCCCAACTAACTGCTTTGTGCGGGAGTCGTAAATGGTTTGGTCCAGGGAGTAGAATAATAATAGCAACAAGAGATGAAGCAAGCCCTCAAGAAGATTTTGTTAAAATTTCTAGAGAAGTAACTGCATATTGTAAAGGACTGCCACTAGCTCATGAAGTTATTGGATCTCTATTGTTTGATAAAGAGATAGAAGAGTGGAAACAAGTATTGGAGAAACTATGGATAATTCCCAATCATCAAGTGCAGAAAAAGCTAAGAATAAGCTTTGATAGCTTAAGTGATGATACAGAGAAAGAAATATTCCTTGACATAGCCTTTTTCTTCATAGGGATAGACCAAAATGATGTAATACATATTTTAGATGAAGCAAATCATCCTACTATTGGAATAAAAAGCCTCAAAGATCGTTGCCTTGTGACCATTGACAATAACAACATGATTGGAATGCATGACTTGCTGTGA 933 0.3516 MITLGIISLFYRNESEDIDRIVEHITGFLGKTFFFVAQHPVGVNSRVDHVIKLLNHRRSKDVGVLGISGIGGIGKTTIAKATYNKIHCDFETWCCLLDIKEKWKQITCQVDLQNQLLSDVYANTKIKIRDIELGKTILKERLQHKRILLILDDVDDLAQLTALCGSRKWFGPGSRIIIATRDEASPQEDFVKISREVTAYCKGLPLAHEVIGSLLFDKEIEEWKQVLEKLWIIPNHQVQKKLRISFDSLSDDTEKEIFLDIAFFFIGIDQNDVIHILDEANHPTIGIKSLKDRCLVTIDNNNMIGMHDLL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120937g00010 310 Gene3D - 35 192 IPR027417 -
Stsc120937g00010 310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 310 IPR044974 GO:0006952
Stsc120937g00010 310 PRINTS Disease resistance protein signature 64 79 - -
Stsc120937g00010 310 PRINTS Disease resistance protein signature 141 155 - -
Stsc120937g00010 310 Pfam NB-ARC domain 45 183 IPR002182 GO:0043531
Stsc120937g00010 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 261 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120937g00010 Stsc-Chr120937 83470 84500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120937g00010 41 310 WRKY Transcription Factor Family AT5G45050 28.197 2.50e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120937g00010 - - ahf:112749643 504.597