Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120934g00014 ATGGCGTCGTTCTTCTCGAAGCTGCCGCTGATTCTCTCGTTCTTTCTGCTTTTCTTCCTCTCTCCCACTCAATCCGCGGTGTTCAGCGTAGATCTAGGTTCTGAATCGATCAAAGTTGCTGTCGTGAACTTGAAACCTGGTCAAACTCCGATCTCCATCGCCATCAACGAGATGTCGAAGCGCAAATCCCCGGCGCTTGTTTCCTTCAACTCCGGCAACCGTCTCCTTGCCGAAGAAGCCGCTGGCCTCACCGCTCGCTATCCACAGAACGTGTACTCACAAATCAGGGACCTCCTAGGGAAACCGTACGGCTTCGCTAAGAAGTTTCTTGATTCAATGTACCTCCCTTTCGAAGTGAAGGAGGATTCCCGAGGCGCGGTGAGCTTCGTGGTGGATGGCGGCGATGGTGGCGCAACTCAGTATTCCCCGGAGGAATTGGTGGCTATGGTGCTTGGGTATGCGGTGCATTTGGCGGAGTTCCACTCCAAGGTTCCGATTAAAGACGCGGTGATTTCGGTGCCGCCTTATTTCGGACAGGCTGAGAGGAAAGGGGTGCTTCAGGCGGCGCAGTTGGCGGGGATTAATGTTCTCTCGCTGATAAATGAGCATTCTGGCGCTGCCTTGCAGTATGGGATTGACAAAGACTTTTCCAATGAGTCAAGGCATGTGGTTTTTTATGACATGGGTTCTGGCAGTACGTATGCTGCACTTGTTAAGGATGTGCGTTGGAACCCAGAGCTGGGTGGCCAGAATATGGAACTACGGTTGGTGGAGCATTTTGCAGATGAGTTCAATAAACAAGTTGGTGGTGGAATAGATGTGAGGAAATTTCCCAAGGCTATGGCAAAATTGAAGAAGCAGGTTAAGCGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCAATTTCAGTTGAATCACTTCATAATGATATAGACTTCAGGAGCTCAATAACCCGTGAGAAGTTTGAGGAGCTCTGTGACGATATTTGGGAAAAATCTCTCCTGCCAGTGAAAGAGGTGATTGAGCATTCTGGCTTATCAGTGGATCAAATATATGCGGTTGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAGCTACAGGCTAAGCTTCAAGAGTTTCTTGGGAGAAAACAACTTGATAGGCATCTTGATGCTGATGAAGCTATTGTTCTTGGTGCAGCTTTGCACGCTGCAAATTTAAGCGATGGAATTAAATTGAACCGAAAGCTAGGAATGATTGATGGTTCTTTGTATGGATATGTCATTGAGTTGGATGGTCCTGATCTTTTGAAGGATGAAAGCTCGAGGCAGTTACTAGTACCACGAATGAAGAAACTACCTAGCAAGATGTTCAGATCCGTTAATCACAACAAGGATTTTGAAGTGTTGCTAGCTTATGAAAGTGAAAATCATTTACCACCGGGTGTTACTTCTCCTGAAATTGCAAAATACCAGATTTCTGGTTTGGCAGATGCAAGTGAGAAATACTCAACTCGTAACCTGTCTTCCCCTATCAAGGCAAATATACATTTCTCTCTAAGTAGAAGCGGAATTCTCTCGATCGATCGGGCTGATGCTGTTATCGAAATAACAGAATGGGTGGAAGTTCCCAAAAAGACACTGACCATAGAGAACTCGACTGTTTCATCAAACATATCAACTGAAGCTGGTGCTAACAACAGTTCCACCGAAAGCAATGAAAACTTGGAAACTGATAGTGGGAGTAATACAACCGACAGTACTGCGGAGGAGAAAGGAGCTGCTGAACCTGTTATGGAGAAAAAGCTTAAAAGGAGGACCTTTAGGGTGCCATTGAAGATTGTTGAGAAAGAACCTGGAATGTCTTTGTCAAAAGATTTTCTTGCTGAAGCCAAAGGAAAATTGGAAGCACTAGACAAAAAAGATGCCGAAAGAAAAAGAACAGCTGAGTTAAAAAATAATTTAGAAGGATATATATATACCACTAAGGAAAAGATTGAAACCATCGAAGAGTTTGAAAAAGTTTCTACAAGTGAAGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTATACACAGATGGTGAAGATGCCAATGCTACCGAGTTTCAAGAGCGTTTGGATATGTTGAAGGCTGTTGGTGATCCAATTTTCTTTAGGTTAAAAGAGCTTACAGCTCGACCAGCTGCTGTCGAACATGCCCAGAAATATCTTGATGAGCTGAAGCAGGTACTGAATTAA 2235 0.4465 MASFFSKLPLILSFFLLFFLSPTQSAVFSVDLGSESIKVAVVNLKPGQTPISIAINEMSKRKSPALVSFNSGNRLLAEEAAGLTARYPQNVYSQIRDLLGKPYGFAKKFLDSMYLPFEVKEDSRGAVSFVVDGGDGGATQYSPEELVAMVLGYAVHLAEFHSKVPIKDAVISVPPYFGQAERKGVLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVVFYDMGSGSTYAALVKDVRWNPELGGQNMELRLVEHFADEFNKQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHNDIDFRSSITREKFEELCDDIWEKSLLPVKEVIEHSGLSVDQIYAVELIGGATRVPKLQAKLQEFLGRKQLDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMIDGSLYGYVIELDGPDLLKDESSRQLLVPRMKKLPSKMFRSVNHNKDFEVLLAYESENHLPPGVTSPEIAKYQISGLADASEKYSTRNLSSPIKANIHFSLSRSGILSIDRADAVIEITEWVEVPKKTLTIENSTVSSNISTEAGANNSSTESNENLETDSGSNTTDSTAEEKGAAEPVMEKKLKRRTFRVPLKIVEKEPGMSLSKDFLAEAKGKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETIEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDMLKAVGDPIFFRLKELTARPAAVEHAQKYLDELKQVLN 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120934g00014 744 Gene3D - 93 149 - -
Stsc120934g00014 744 SUPERFAMILY Actin-like ATPase domain 220 401 IPR043129 -
Stsc120934g00014 744 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 409 550 IPR029047 -
Stsc120934g00014 744 SUPERFAMILY Actin-like ATPase domain 27 214 IPR043129 -
Stsc120934g00014 744 FunFam Heat shock 70 kDa protein 4 617 729 - -
Stsc120934g00014 744 CDD HYOU1-like_NBD 29 399 - -
Stsc120934g00014 744 Pfam Hsp70 protein 28 717 IPR013126 GO:0005524|GO:0140662
Stsc120934g00014 744 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 644 726 IPR029048 -
Stsc120934g00014 744 Gene3D - 30 399 - -
Stsc120934g00014 744 PANTHER HSC70CB, ISOFORM G-RELATED 25 742 - -
Stsc120934g00014 744 Gene3D - 617 729 IPR029048 -
Stsc120934g00014 744 FunFam Heat shock 70 kDa protein 4 248 333 - -
Stsc120934g00014 744 Gene3D - 215 381 - -
Stsc120934g00014 744 PRINTS 70kDa heat shock protein signature 58 70 - -
Stsc120934g00014 744 PRINTS 70kDa heat shock protein signature 352 368 - -
Stsc120934g00014 744 PRINTS 70kDa heat shock protein signature 169 189 - -
Stsc120934g00014 744 PRINTS 70kDa heat shock protein signature 26 39 - -
Stsc120934g00014 744 PRINTS 70kDa heat shock protein signature 384 404 - -
Stsc120934g00014 744 MobiDBLite consensus disorder prediction 553 594 - -
Stsc120934g00014 744 ProSitePatterns Heat shock hsp70 proteins family signature 3. 355 369 IPR018181 -
Stsc120934g00014 744 Gene3D Actin; Chain A, domain 4 248 333 - -
Stsc120934g00014 744 MobiDBLite consensus disorder prediction 553 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120934g00014 Stsc-Chr120934 104047 109946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120934g00014 24 526 Calmodulin-binding Proteins AT3G12580 28.681 1.55e-63 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120934g00014 K09486 - gmx:100786898 1175.61