Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120933g00010 ATGACTAAGAGAACGAAGAAGGCAGGCATCGTCGGAAAATATGGTACCAGATATGGTGCCAGTCTGCGGAAGCAGATTAAGAAGATGGAGGTTAGTCAACACAGCAAGTTCTTCTGTGAATTTTGTGGCAAGTATGCTGTGAAGAGAAAGGCTGTAGGAATATGGGGATGCAAGGATTGTGGAAAAGTGAAAGCAGGAGGCCTACACTTTGAACACTGCTAG 222 0.4505 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGLHFEHC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120933g00010 73 PANTHER ZGC:171772 1 68 - -
Stsc120933g00010 73 Pfam Ribosomal L37ae protein family 4 67 IPR002674 GO:0003735|GO:0005840|GO:0006412
Stsc120933g00010 73 Gene3D - 1 72 IPR011331 GO:0003735|GO:0005840|GO:0006412
Stsc120933g00010 73 SUPERFAMILY Zn-binding ribosomal proteins 10 69 IPR011332 GO:0006412
Stsc120933g00010 73 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120933g00010 Stsc-Chr120933 56580 57750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120933g00010 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 89.855 2.43e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120933g00010 K02921 - qsa:O6P43_034017 144.821