Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120933g00006 ATGATGTGTTTATTCTTCAAACGAAAATCCAAATCCGACGCAGAACTCCAAAAACCAACCAAGAAGCCATCGCCATCGCCATCGCCATCGGGAAGGGGTGTGAGGGAACTGTACAAGGAGAAGCAACACAACTTGAGAGTCTTCACTCTCAGGGAGCTCATTGATGCCACCAATGGCTTCAACAGGATGCTCAAGATCGGTGAAGGTGGTTTCGGCAGTGTTTATAGAGGAACCATTACACCTCCTCTACCTCAACATTCTCATCCAATTCTCGTTGCTATCAAGAAGCTCAACACCCGTGGCTTTCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGCATCGTTAGCCACCCGAATCTGGTTAAGCTATTGGGCTACTGCTCCGTAGACACCGAGAGAGGGATTCAACGGCTATTGGTCTATGAATTCATGCCAAACAGGAGCCTTGAGGATCATCTCTTCAACCATTCTTTACCTCACTTGCCTTGGAAAACTAGATTGCACATCATGCTTGGTGCTGCTCAAGGTTTGGATTACTTACATCATGGATTGGAGCTTCAGGTGATCTACAGAGATTTCAAATCTTCAAATGTGCTCTTGGACAAAAGTTTTCATCCCAAGCTTTCGGATTTTGGTCTTGCTAGGGAGGGCCCAACCGCTGGCCACACTCATGTATCTACTGCAGTAGTTGGGACACAGGGATATGCAGCACCAGAATATGTGGAAACAGGACATCTCAGAGCTAAGAGTGACATATGGAGTTTCGGTGTGGTGCTCTATGAGATTCTCACAGGCAGGAGGGTACTGGAAAGAGATCGTCCAACCGGAGAACAGAAGCTTCTAGAATGGGTCAAGAAGTACCCTGCTGATACTAGCAGGTTCACCACCATAATGGACCCTCGCCTCAGGAACCAATACTCCCTTGTTTCGGCTCGAAAGATCGCCAAGTTGGCTGATAGTTGCTTGAAGAAAAACCCCGACGACAGGCCATCCATGAGTGACATAGTGGAAAGCTTGAAGCAAGCATTGCAGCTTTCAGAAACCTCAAGCAATTCTCAAAACATGGCACCTCAATCTCCCAAACCAAAGTTGGTCCGAAAAGGTTCATAG 1119 0.4701 MMCLFFKRKSKSDAELQKPTKKPSPSPSPSGRGVRELYKEKQHNLRVFTLRELIDATNGFNRMLKIGEGGFGSVYRGTITPPLPQHSHPILVAIKKLNTRGFQGHKEWLAEVQFLGIVSHPNLVKLLGYCSVDTERGIQRLLVYEFMPNRSLEDHLFNHSLPHLPWKTRLHIMLGAAQGLDYLHHGLELQVIYRDFKSSNVLLDKSFHPKLSDFGLAREGPTAGHTHVSTAVVGTQGYAAPEYVETGHLRAKSDIWSFGVVLYEILTGRRVLERDRPTGEQKLLEWVKKYPADTSRFTTIMDPRLRNQYSLVSARKIAKLADSCLKKNPDDRPSMSDIVESLKQALQLSETSSNSQNMAPQSPKPKLVRKGS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120933g00006 372 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 147 357 - -
Stsc120933g00006 372 Gene3D Phosphorylase Kinase; domain 1 33 146 - -
Stsc120933g00006 372 CDD STKc_IRAK 66 344 - -
Stsc120933g00006 372 ProSiteProfiles Protein kinase domain profile. 60 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120933g00006 372 ProSitePatterns Protein kinases ATP-binding region signature. 66 96 IPR017441 GO:0005524
Stsc120933g00006 372 PANTHER OS01G0588500 PROTEIN-RELATED 24 346 - -
Stsc120933g00006 372 MobiDBLite consensus disorder prediction 1 34 - -
Stsc120933g00006 372 MobiDBLite consensus disorder prediction 346 362 - -
Stsc120933g00006 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Stsc120933g00006 372 MobiDBLite consensus disorder prediction 346 372 - -
Stsc120933g00006 372 Pfam Protein kinase domain 62 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120933g00006 372 SUPERFAMILY Protein kinase-like (PK-like) 42 342 IPR011009 -
Stsc120933g00006 372 Gene3D Transferase(Phosphotransferase) domain 1 147 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120933g00006 Stsc-Chr120933 43236 45091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120933g00006 39 342 Glycoside Hydrolase AT3G07070 45.779 4.86e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc120933g00006 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120933g00006 - - gmx:100786966 561.222