LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc120933g00004	ATGGCGGCGCTTTCGCCGGCGCTGAACAGCAACAACCAGAAGGCAGTGTCATTGAGCGGCGGAGCAAACCCTCCAAAATCGCAACGTGGTCAGAACAAGCCAAAGTGCAAGCAGTGCGGCAATGTTGCTCGCTCTAGGTGTCCGTATGAATCATGCAAGAGTTGCTGTTCAAGGAATCAAAATCCCTGCCATATTCACGTTCTGAAGGCAAGTTCAACTTTGTCTGACAAGGCACCATCTTCCAGTGCTGCGCCGATTGAGCCGCAATCTGTGGAGCCATCTCAATCATCAACTGCAAGTAGAGTTGCATCACTTCGACAACTTTCCAACAGTTTTGCCCAGTTCAATAATTTGAACATTTCATTTCGCTCGAGGAAACCACTAACTAGAAAGGATGCTGCAGCTATAAATGAATGGAGATTTTCAAAGTTAAGGGAATACAAGGAACGGAATATTGAACTGGAAAATGAAACATTTGACAGATACATGCAGAATATAGATTTACTAGAAGAAGTATTGGCAGTTAAGTCTATGGAAGACAATGTGTCTTCTGCATCAGAGTCCGATACTTCTTCGGAGATGTACAATGATCTAATGGTAACGAAGCTAAAATTGCAACTAAGATCAAACTCCGTGGGAAGCGACNNNNNNNNNNGAATGAGAATGCAACAAATTGTAGACAGGGGATTAAAGAAGCTTAAGATGTCTGCAGTCAATGGTGCCGCCACTGAAGCATCTAGTGACGATCCCAATAACACTTCTGGAACAGGGAAAAGTTTGAGGACTGAAAGGTTGTCTGCAATAAGCGATCTTGTTGATAAAATTAACAAAGCCCGAAGTGAGGAGGATTTGAAGTCATGCTTGGAGATAAAGTCCCAACTCTTCAATTTGGATGGGGGATCCGGCATAGTAGACCCTCAACCTCAAGACAGCGAGACACATGGAAAAGAAATTGATCAAAGTGATTCAACATCAGGAAAAGAATTGGATTATTCTTTACCAAAATTGGTTGAAACTAATGATATGGATCAAGAAACTCTAAACACCATCGACAAACATTTTTCTTCCCTTAAGTATTTAGAGTTTTGA	1089	0.4178	MAALSPALNSNNQKAVSLSGGANPPKSQRGQNKPKCKQCGNVARSRCPYESCKSCCSRNQNPCHIHVLKASSTLSDKAPSSSAAPIEPQSVEPSQSSTASRVASLRQLSNSFAQFNNLNISFRSRKPLTRKDAAAINEWRFSKLREYKERNIELENETFDRYMQNIDLLEEVLAVKSMEDNVSSASESDTSSEMYNDLMVTKLKLQLRSNSVGSDXXXXMRMQQIVDRGLKKLKMSAVNGAATEASSDDPNNTSGTGKSLRTERLSAISDLVDKINKARSEEDLKSCLEIKSQLFNLDGGSGIVDPQPQDSETHGKEIDQSDSTSGKELDYSLPKLVETNDMDQETLNTIDKHFSSLKYLEF	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	237	261	-	-
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	240	261	-	-
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	76	98	-	-
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	310	324	-	-
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	1	39	-	-
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	298	334	-	-
	Stsc120933g00004	362	PANTHER	ELECTRON CARRIER/IRON ION-BINDING PROTEIN	1	360	-	-
	Stsc120933g00004	362	MobiDBLite	consensus disorder prediction	1	35	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc120933g00004	Stsc-Chr120933	36696	39128	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	SRS	Stsc120933g00004		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc120933g00004	-		-	gmx:100816049	449.514