Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc120933g00003 | ATGATGATGGCTGTTCAAGCTCAATACCCATCCAATGTTCTTCTTCTCAATAACAATACCAATAACAATAACAACAACAACAATGACCTCCATGACTATTCCTCCTTACAACCTCCTCCATCTATTGGGCGTAAGAGACCAAGAGAACATCAAAACCCAAATGCCATCAATGAACCTCCTTATCAAGTAATACACCAAACCCACCTCCACAATCACAATCTAGTCTCCACAGGCTTACGCTTATCCTTCTCCTCTCTTCAACCCCATCAACAACAACAAGCACTACAATTGCAGCAAACTTCTCTCAACTCATCATCATCGTCGTCGTCTCTATTATCCCAACAATTAGCCTCCCAAATCAAACAACAAAGACACGAAATTGACCAATTCCTACAAGCACAGGGAGAGCAACTGCGGCGTTCGTTAGCGGACAAGAGACAAACTCATTTCCGCGCGCTTCTAACCGCCGCGGAAGATACCTTAGCGCGACGCTTGAAGGATAAAGAAGAAGAAGTCCAGAAAGCCACGCGCCGTAACGCTGAGTTAGAAGCACAAGCCGCGCACCTTACCGCCCAGGCTCAGCTTTGGCAGGCCAAGGCAAAAGCGCAGGAAGCCACCGCCGCTTCTTTGCAGGCACAGCTCCATCACGCCATCATGAACGCCGGCGGCGGTGGTCCTTGCACAGCGGAGGACGGCGGCGCAGGGGTAATGTCGTGCGCGGAGGACGCGGAGTCTGCGTACGTTGACCCAGAGCGAGTGGCGGCGGCGGGTCCAAGGTGCCGAGGGTGCGAGAAACGCGTAGCGTCGGTGGTGGTGCTGCCATGTCGGCATTTATGCGTTTGCGGCGAATGCGAGAGGCATTTCCGTGCTTGCCCCGTTTGCCTCACCGTTAAAAATTCTACCGTTGAGGTTTTTCTTTCTTAG | 924 | 0.5173 | MMMAVQAQYPSNVLLLNNNTNNNNNNNNDLHDYSSLQPPPSIGRKRPREHQNPNAINEPPYQVIHQTHLHNHNLVSTGLRLSFSSLQPHQQQQALQLQQTSLNSSSSSSSLLSQQLASQIKQQRHEIDQFLQAQGEQLRRSLADKRQTHFRALLTAAEDTLARRLKDKEEEVQKATRRNAELEAQAAHLTAQAQLWQAKAKAQEATAASLQAQLHHAIMNAGGGGPCTAEDGGAGVMSCAEDAESAYVDPERVAAAGPRCRGCEKRVASVVVLPCRHLCVCGECERHFRACPVCLTVKNSTVEVFLS | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc120933g00003 | 307 | MobiDBLite | consensus disorder prediction | 15 | 35 | - | - | |
Stsc120933g00003 | 307 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 240 | 307 | IPR013083 | - | |
Stsc120933g00003 | 307 | PIRSF | SBP1_RNase_bind | 2 | 307 | IPR017066 | - | |
Stsc120933g00003 | 307 | Pfam | Zinc finger, C3HC4 type (RING finger) | 259 | 296 | - | - | |
Stsc120933g00003 | 307 | PANTHER | SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN | 28 | 304 | IPR017066 | - | |
Stsc120933g00003 | 307 | ProSiteProfiles | Zinc finger RING-type profile. | 260 | 294 | IPR001841 | - | |
Stsc120933g00003 | 307 | MobiDBLite | consensus disorder prediction | 15 | 58 | - | - | |
Stsc120933g00003 | 307 | Coils | Coil | 158 | 213 | - | - | |
Stsc120933g00003 | 307 | FunFam | probable BOI-related E3 ubiquitin-protein ligase 2 | 242 | 306 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc120933g00003 | Stsc-Chr120933 | 24238 | 25947 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc120933g00003 | 254 | 294 | C3H Transcription Factor Family | AT3G06140 | 37.778 | 9.47e-06 | 44.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc120933g00003 | K19042 | - | gmx:100779548 | 278.485 |