Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120933g00001 ATGGATCAAAGTATAGTGTCAATGACCACAGCTAGAGATACTTTGGGCTACATTGCACCAGAGGTATTTTCTAGGAACTTTGGCTATGTATCGTGTAAATCGGATGTATATAGCTATGGAATGCTGCTGCTTGAAATGGTTAGTGAAAGAAAAATCACTGATGTCACAAAAGAAAATAGCAGTCATGTTTATTACCCTAAATGGATTTACAATCTTCTAGATACCAAAGAAGACATTAAAATCCATGTGAAAGGAGATGAAGACACTAGAGTTGCAAAGAAGCTATCAATTGTGGGACTTTGGGAGGGTTTAGATATGTCTCCTAATCCTTTTACCTCTACTACTACAATCAAAACAAGGGCCATATTTTGTAATGGAAGTCTGAACCAAGAACTAGATGTTATCTCAGAAATAGAGTGA 420 0.3643 MDQSIVSMTTARDTLGYIAPEVFSRNFGYVSCKSDVYSYGMLLLEMVSERKITDVTKENSSHVYYPKWIYNLLDTKEDIKIHVKGDEDTRVAKKLSIVGLWEGLDMSPNPFTSTTTIKTRAIFCNGSLNQELDVISEIE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120933g00001 139 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 101 IPR045874 GO:0004672
Stsc120933g00001 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120933g00001 139 Pfam Protein tyrosine and serine/threonine kinase 5 57 IPR001245 GO:0004672|GO:0006468
Stsc120933g00001 139 Gene3D Transferase(Phosphotransferase) domain 1 1 102 - -
Stsc120933g00001 139 SUPERFAMILY Protein kinase-like (PK-like) 7 72 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120933g00001 Stsc-Chr120933 710 1129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120933g00001 3 111 Receptor kinase-like Gene Family AT5G38260 49.565 2.97e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc120933g00001 PK_Tyr_Ser-Thr 3.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120933g00001 - - tpra:123914140 180.259