Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120932g00007 ATGGCAAAATTCAGAAAATTAATCACTCTTCTCCTCAACATATCCTTCCTATTCCTCCTAATTATCCTCCTAATAACACAACCTTCAAACATTCCTCACCAAAATTATCATAATTCCAAAAATGCCCCTGCCACCGCCACCGCCACTGCCGCGGCCAAGAACAGAATGTTCAACCATGCAAGGCTCCTAACAAGTGACATCAGTGTAGAAGGCTGCACAGACCTCCATACATTCTCCGATTACGCTTCAAAATGCTACTACGTTCAAACCCACGAAGACTGCAGATCAAAGGGCTACATAAACTACCTCCACATCTTCTATTGCAATCTCGGAAACTCTCCGATCCTCGGCCACACTCTTCTAGCCCTATGGCTCGCCGTCATGTTCTATCTTCTCGGCGACACCGCCTCGAACTACTTCTGCAACAATCTAGAAGGACTCTCCAAGATCCTAAGACTATCACCCACCATTGCAGGGGTCACCCTCCTCTCTCTAGGGAACGGCGCCCCCGATTTCTTCGCCAGCGTGGTCTCGTTCACGAAAACCAGCGACGGCGCCGTCGGTCTCAACAGCATTCTCGGCGGTGCTTTCTTTGTCTCGAGCGCTGTGATGGGAATCATAAGCATTCTGGTTTGCAAGAAAGAGGTTTGTGTTGATAAAGCGAGTTTCATTAGAGACGTGATTTTCTTCCTGTTCTCGCTGTTCGTGCTCTTGATCATGATCTCCGTTGGGAAACTCACGTTGCTGGGTTCGATCTGCTATGTGTCTATATATTTTCTTTATGTTTGTGCTGTTTCTGCAACGCATTTTATGTATGGAGATGATGAGAATCGAGAAGGTGAGGGAGAGTTTGCAGTTGGGTCGTCTTCATCGGATGAATCACTGCTGGAATCGGGGATTCCGTTGTTGGGATATGTTGATGATGAAAAACCGCCGATGAATCATCAGTTAGAGAAAGTTGTTGAAGAAAGCAATGATGATGATGAAGAAGAGCAAAGAGGAACTTTTGATATTTTGAAACATGCAGAGCATAGGATATTGGATTGGAATCACTTAGGAAAGTTTCTACAAATCCTAGAATTGCCACTTTCTTTACCAAGAAGGCTAACAATTCCAGTTGTGAGTGAAGAGAAGTGGTCCAAGCCATATGCAGTTATCTCAGTGACACTAGCACCAGTTTTGTTGGCAACAGTTTACAACACCCAAAAGGAGAATGTGAGTTCAAGAAGCAGCTTAGTTACCTATCTAACCTCTTCATTGGTTGGAATCATCTTAGCCAACATGGCATGTGTCACCACAAAGAGTTGTAGCCCACCAAGGAGGTGCTTGTTCCCATGGCTATCTGGTGGCTTTGTAATGAGTGTGACATGGACTTACATCATTGCTGAGGAGCTTGTTTCACTCTTGGTATCAATTGGGAACATCATTGGGGTTAGCCCTTCAATTTTAGGGCTAACTGTCCTTGCTTGGGGCAATTCCCTAGGTGATTTGATAGCCAATGGTGCTATGGCTATGAATGGTGGGCCGGATGGGGCCCAAATGGCTATTTCTGGATGCTATGCTGGGCCTATGTTTAATACCTTAATGGGCTTGGGCCTGCCTCTTGTTCTCTCAGCATTGAATGATTATCCTGATCCTTATGTTATTCCTAAGGATACTTCTTTGTATCAAACAATTCTGTTCTTGATGGGAGGGGTTCTTTGGGCCCTTGTGATTTTGCCAAAGAAGAACATGAAGCTGGATAAATCATTGGGGGTAGGACTTTTGACTATATACCTTTGCTTCCTGTTCATAAGGATAGCCATGGCAATTGGTGTGGTTCAATTCTAA 1830 0.4475 MAKFRKLITLLLNISFLFLLIILLITQPSNIPHQNYHNSKNAPATATATAAAKNRMFNHARLLTSDISVEGCTDLHTFSDYASKCYYVQTHEDCRSKGYINYLHIFYCNLGNSPILGHTLLALWLAVMFYLLGDTASNYFCNNLEGLSKILRLSPTIAGVTLLSLGNGAPDFFASVVSFTKTSDGAVGLNSILGGAFFVSSAVMGIISILVCKKEVCVDKASFIRDVIFFLFSLFVLLIMISVGKLTLLGSICYVSIYFLYVCAVSATHFMYGDDENREGEGEFAVGSSSSDESLLESGIPLLGYVDDEKPPMNHQLEKVVEESNDDDEEEQRGTFDILKHAEHRILDWNHLGKFLQILELPLSLPRRLTIPVVSEEKWSKPYAVISVTLAPVLLATVYNTQKENVSSRSSLVTYLTSSLVGIILANMACVTTKSCSPPRRCLFPWLSGGFVMSVTWTYIIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGAQMAISGCYAGPMFNTLMGLGLPLVLSALNDYPDPYVIPKDTSLYQTILFLMGGVLWALVILPKKNMKLDKSLGVGLLTIYLCFLFIRIAMAIGVVQF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120932g00007 609 Pfam Sodium/calcium exchanger protein 449 600 IPR004837 GO:0016020|GO:0055085
Stsc120932g00007 609 Pfam Sodium/calcium exchanger protein 122 264 IPR004837 GO:0016020|GO:0055085
Stsc120932g00007 609 Gene3D - 153 288 IPR044880 -
Stsc120932g00007 609 Gene3D - 383 601 IPR044880 -
Stsc120932g00007 609 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 12 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120932g00007 Stsc-Chr120932 41055 44265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120932g00007 75 608 Antiporters AT5G17860 50.838 2.66e-180 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120932g00007 K13754 - gmx:100818583 809.675